RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 OR5H2Q8NGV7 314 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 VSTM2AQ8TAG5 236 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 HRASLSQ9HDD0 168 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 SMAD5-AS1Q9Y6J3 95 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 SMIM31A0A1B0GVY4 71 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 DPPA5A6NC42 116 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 CGB1A6NKQ9 187 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 PPP5D1E7EU14 171 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 BMPR1BO00238 502 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 S1PR2O95136 353 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 NDUFB8O95169 186 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 IGLV1-51P01701 117 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 HLA-AP01891 365 aaKnown RBP8.13□□□□□ -1.11
COL6A3-214ENST00000493608 SMIM18P0DKX4 95 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 NAT1P18440 290 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 ELK1P19419 428 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 HRH1P35367 487 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
COL6A3-214ENST00000493608 CATR1Q13166 79 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 MSMO1Q15800 293 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 ZNF124Q15973 351 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 C15orf32Q32M92 178 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 RNASE12Q5GAN4 147 aaKnown RBP8.13□□□□□ -1.11
COL6A3-214ENST00000493608 DHRS11Q6UWP2 260 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 IL34Q6ZMJ4 242 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 SLC25A42Q86VD7 318 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 SLC2A9Q9NRM0 540 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 FBXL7Q9UJT9 491 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 ANAPC10Q9UM13 185 aa8.13□□□□□ -1.11
COL6A3-214ENST00000493608 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 FAM25AB3EWG3 89 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 FAM25CB3EWG5 89 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 FAM25GB3EWG6 89 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 UPK2O00526 184 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 PGLYRP1O75594 196 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-214ENST00000493608 HPRT1P00492 218 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 RLN1P04808 185 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 CSN3P07498 182 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 ZNF735P0CB33 412 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 NHLRC4P0CG21 123 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-214ENST00000493608 HLA-GP17693 338 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 MAS1LP35410 378 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 RORCP51449 518 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 TATDN3Q17R31 274 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 GPR107Q5VW38 600 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 SBSPONQ8IVN8 264 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 NECAP1Q8NC96 275 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 DMBX1Q8NFW5 382 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 OR6F1Q8NGZ6 308 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 GPX8Q8TED1 209 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 MOB3AQ96BX8 217 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 ZNF257Q9Y2Q1 563 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 U3KQK5 164 aa8.12□□□□□ -1.11
COL6A3-214ENST00000493608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
COL6A3-214ENST00000493608 IZUMO1RA6ND01 250 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 NPIPB5A8MRT5 1133 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 RBFOX2O43251 390 aaKnown RBP eCLIP8.11□□□□□ -1.11
COL6A3-214ENST00000493608 OR2C1O95371 312 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 APOA1P02647 267 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 FRMD6-AS1P0C7T7 363 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 NQO2P16083 231 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 EDN2P20800 178 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 PSMB6P28072 239 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 LPAR6P43657 344 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 TAS2R31P59538 309 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 TAS2R46P59540 309 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 TSPAN5P62079 268 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 CTF1Q16619 201 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 PHLDA2Q53GA4 152 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 AIFM2Q9BRQ8 373 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 FXYD6Q9H0Q3 95 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 TMEM140Q9NV12 185 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 NSG2Q9Y328 171 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 DMRT1Q9Y5R6 373 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 SELENOKQ9Y6D0 94 aa8.11□□□□□ -1.11
COL6A3-214ENST00000493608 M0QYG6 137 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 GPR31O00270 319 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 KRASP01116 189 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CRYGCP07315 174 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 DEFA4P12838 97 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CTRB1P17538 263 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 OR2B8PP59922 312 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CTRB2Q6GPI1 263 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CLEC19AQ6UXS0 136 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 ADAMTSL5Q6ZMM2 481 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 Q8N1Y9 231 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 OR10W1Q8NGF6 305 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 OR4A5Q8NH83 315 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CD300LFQ8TDQ1 290 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 FCAMRQ8WWV6 532 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 CMTM3Q96MX0 182 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 WWC2-AS2Q96NR7 200 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 PLEKHA2Q9HB19 425 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 ZC4H2Q9NQZ6 224 aa8.1□□□□□ -1.11
COL6A3-214ENST00000493608 TEX50A0A1B0GTY4 177 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
COL6A3-214ENST00000493608 GABARAPO95166 117 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms