RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
SEC13-218ENST00000490283 F2RP25116 425 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 FXYD6Q9H0Q3 95 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 TNCP24821 2201 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 UPK2O00526 184 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 CRYGCP07315 174 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 FGF2P09038 288 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 AREGP15514 252 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 CTF1Q16619 201 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
SEC13-218ENST00000490283 LYSMD2Q8IV50 215 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 C15orf40Q8WUR7 153 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 DGCR14Q96DF8 476 aaKnown RBP13.34□□□□□ -0.27
SEC13-218ENST00000490283 ASCL2Q99929 193 aa13.34□□□□□ -0.27
SEC13-218ENST00000490283 SRSF8Q9BRL6 282 aaKnown RBP13.34□□□□□ -0.27
SEC13-218ENST00000490283 NAA50Q9GZZ1 169 aaKnown RBP13.34□□□□□ -0.27
SEC13-218ENST00000490283 MARCH11A6NNE9 402 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 E7EUB6 86 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 BMPR1BO00238 502 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 IFNA6P05013 189 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 RPA2P15927 270 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 CTRB1P17538 263 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 OR2B8PP59922 312 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 CTRB2Q6GPI1 263 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 WWC2-AS2Q96NR7 200 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.28
SEC13-218ENST00000490283 SIGLEC8Q9NYZ4 499 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 THYN1Q9P016 225 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 U3KQK5 164 aa13.33□□□□□ -0.28
SEC13-218ENST00000490283 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
SEC13-218ENST00000490283 SNAPC5O75971 98 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 REG1AP05451 166 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 MYOD1P15172 320 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 LPAR6P43657 344 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 PHLDA2Q53GA4 152 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 HSD17B13Q7Z5P4 300 aaPredicted RBP13.32□□□□□ -0.28
SEC13-218ENST00000490283 SGPP2Q8IWX5 399 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 CXorf58Q96LI9 332 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 EXTL2Q9UBQ6 330 aa13.32□□□□□ -0.28
SEC13-218ENST00000490283 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TRAV3A0A0B4J244 114 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 A0A1B0GW64 132 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TPPPO94811 219 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 NDUFB8O95169 186 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 KRASP01116 189 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TRAPPC2P0DI81 140 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TRAPPC2BP0DI82 140 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 RNASE12Q5GAN4 147 aaKnown RBP13.31□□□□□ -0.28
SEC13-218ENST00000490283 RNASE10Q5GAN6 216 aaKnown RBP13.31□□□□□ -0.28
SEC13-218ENST00000490283 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 SLC38A6Q8IZM9 456 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 Q8N402 240 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 DYNLRB2Q8TF09 96 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 FCAMRQ8WWV6 532 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
SEC13-218ENST00000490283 TRBV7-1A0A0A6YYK4 115 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 PPP5D1E7EU14 171 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 RGS5O15539 181 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 CSN3P07498 182 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 ARL3P36405 182 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 UCP3P55916 312 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 IL34Q6ZMJ4 242 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 HINT2Q9BX68 163 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 FAM212BQ9NTI7 297 aaPredicted RBP13.3□□□□□ -0.28
SEC13-218ENST00000490283 FKBP11Q9NYL4 201 aa13.3□□□□□ -0.28
SEC13-218ENST00000490283 IGLV11-55A0A075B6I3 123 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 IGLC7A0M8Q6 106 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 CGB1A6NKQ9 187 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 M0QYG6 137 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 IGHV3-23P01764 117 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 PGAM2P15259 253 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 TBPP20226 339 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 G6PCP35575 357 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 FAM106AQ4KMX7 169 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 TBC1D26Q86UD7 250 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 CADM3Q8N126 398 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 PRNDQ9UKY0 176 aa13.29□□□□□ -0.28
SEC13-218ENST00000490283 NOL3O60936 208 aaKnown RBP13.28□□□□□ -0.28
SEC13-218ENST00000490283 OR2C1O95371 312 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 KLK9Q2XQG4 91 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 CLVS1Q8IUQ0 354 aaPredicted RBP13.28□□□□□ -0.28
SEC13-218ENST00000490283 ARRDC1Q8N5I2 433 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 GDPD1Q8N9F7 314 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 OR52I2Q8NH67 350 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 LSM10Q969L4 123 aaKnown RBP13.28□□□□□ -0.28
SEC13-218ENST00000490283 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 KLK11Q9UBX7 282 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 KLK9Q9UKQ9 250 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 OR51B2Q9Y5P1 312 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms