RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZNF32P17041 273 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 RPL7P18124 248 aaKnown RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 RPS3P23396 243 aaKnown RBP eCLIP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 S100A2P29034 98 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 S100A7P31151 101 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TGFBR1P36897 503 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 POLR2HP52434 150 aaKnown RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 PSG9Q00887 426 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 BSPH1Q075Z2 132 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 BAMBIQ13145 260 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 DHRS2Q13268 280 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 HTR4Q13639 388 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 SCGB2B2Q4G0G5 96 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 Q5W150 140 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 SCXQ7RTU7 201 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 ANGPTL5Q86XS5 388 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TMEM86AQ8N2M4 240 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 ZFAND2AQ8N6M9 145 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 CD177Q8N6Q3 437 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 Q8N9W7 124 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 OR10D4PQ8NGN7 298 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 LINC01560Q8TB33 94 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 SLC25A40Q8TBP6 338 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 RAB2BQ8WUD1 216 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 SLC25A46Q96AG3 418 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 RMI2Q96E14 147 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 ADAT3Q96EY9 351 aaPredicted RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 PHYHIPLQ96FC7 376 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 FOPNLQ96NB1 174 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 PFDN5Q99471 154 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 CCDC32Q9BV29 185 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 PLA2G12AQ9BZM1 189 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 CCDC90BQ9GZT6 254 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TMEM126AQ9H061 195 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 C11orf68Q9H3H3 251 aaKnown RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 LHX9Q9NQ69 397 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TVP23BQ9NYZ1 205 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 RPUSD1Q9UJJ7 312 aaKnown RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 AMMECR1Q9Y4X0 333 aaPredicted RBP2.23□□□□□ -2.05
PRPF4-203ENST00000488937 FMN1Q68DA7 1419 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TRIOBPQ9H2D6 2365 aa2.23□□□□□ -2.05
PRPF4-203ENST00000488937 TRAV36DV7A0A075B6V5 113 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 RIIAD1A6NNX1 92 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 C11orf94C9JXX5 98 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 TMX2-CTNND1H3BSU7 103 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 PLA2G10O15496 165 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 CST8O60676 142 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 IFNA7P01567 189 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 HLA-DQB1P01920 261 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 HTR1AP08908 422 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 CD28P10747 220 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 NTF3P20783 257 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 SDC4P31431 198 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 PPP1CCP36873 323 aaKnown RBP2.22□□□□□ -2.05
PRPF4-203ENST00000488937 DEFA6Q01524 100 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 RHEBQ15382 184 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 OR8B8Q15620 311 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 RPL13AP3Q6NVV1 102 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 PRSS54Q6PEW0 395 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 AGTRAPQ6RW13 159 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 AMN1Q8IY45 258 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 LYG1Q8N1E2 194 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 RNASE11Q8TAA1 199 aaKnown RBP2.22□□□□□ -2.05
PRPF4-203ENST00000488937 C2orf50Q96LR7 162 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 CARD19Q96LW7 228 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 SPIN2AQ99865 258 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 SPIN2BQ9BPZ2 258 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 TBL1YQ9BQ87 522 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 ZNF355PQ9NSJ1 428 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 TP73-AS1Q9UF72 201 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 ZNF222Q9UK12 451 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 SOGA1O94964 1423 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 UHRF1BP1Q6BDS2 1440 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 ANKRD31Q8N7Z5 1873 aa2.22□□□□□ -2.05
PRPF4-203ENST00000488937 IGSF9BQ9UPX0 1349 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 COL5A2P05997 1499 aaPredicted RBP2.21□□□□□ -2.06
PRPF4-203ENST00000488937 SCRIBQ14160 1630 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 CABIN1Q9Y6J0 2220 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 A0A1B0GV90 55 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 A0A1W2PNU3 283 aaPredicted RBP2.21□□□□□ -2.06
PRPF4-203ENST00000488937 A0A1W2PP18 115 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 DPRXA6NFQ7 191 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 IGLL5B9A064 214 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 CLDN25C9JDP6 229 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 J3KT08 172 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 BCL9O00512 1426 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 ZNF324O75467 553 aaPredicted RBP2.21□□□□□ -2.06
PRPF4-203ENST00000488937 SULT1C4O75897 302 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 APOC1P02654 83 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 SRP19P09132 144 aaKnown RBP2.21□□□□□ -2.06
PRPF4-203ENST00000488937 ZNF806P0C7X5 589 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 SMIM17P0DL12 118 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 IGHV3-30-3P0DP02 117 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 OGNP20774 298 aaKnown RBP2.21□□□□□ -2.06
PRPF4-203ENST00000488937 NPY1RP25929 384 aa2.21□□□□□ -2.06
PRPF4-203ENST00000488937 SRIP30626 198 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms