RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SMAD5-AS1Q9Y6J3 95 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.55□□□□□ -0.24
ITGB1-215ENST00000488494 CGB1A6NKQ9 187 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 GPR31O00270 319 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 UPK2O00526 184 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 IGLV1-51P01701 117 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 ZNF182P17025 639 aaPredicted RBP13.55□□□□□ -0.24
ITGB1-215ENST00000488494 PSMB6P28072 239 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 OR2B8PP59922 312 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 IL34Q6ZMJ4 242 aa13.55□□□□□ -0.24
ITGB1-215ENST00000488494 MARCH11A6NNE9 402 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 M0QYG6 137 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 CRYGCP07315 174 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 F2RP25116 425 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 ALDH3B2P48448 385 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 TSPAN5P62079 268 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
ITGB1-215ENST00000488494 ASCL2Q99929 193 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 COMMD5Q9GZQ3 224 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 EXTL2Q9UBQ6 330 aa13.54□□□□□ -0.24
ITGB1-215ENST00000488494 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 PPP5D1E7EU14 171 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 DHFRP00374 187 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 IGHV3-23P01764 117 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 CTRB1P17538 263 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 CTRB2Q6GPI1 263 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 FANCD2OSQ96PS1 177 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 S4R3C0 116 aa13.53□□□□□ -0.24
ITGB1-215ENST00000488494 NDUFB8O95169 186 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 CSN3P07498 182 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 FGF2P09038 288 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 NHLRC4P0CG21 123 aaPredicted RBP13.52□□□□□ -0.25
ITGB1-215ENST00000488494 DEFA4P12838 97 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 LPAR6P43657 344 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 SPCS2Q15005 226 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 TATDN3Q17R31 274 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 CCDC140Q96MF4 163 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 QTRT1Q9BXR0 403 aaKnown RBP13.52□□□□□ -0.25
ITGB1-215ENST00000488494 KLK11Q9UBX7 282 aa13.52□□□□□ -0.25
ITGB1-215ENST00000488494 STAB2Q8WWQ8 2551 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 IGLV11-55A0A075B6I3 123 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 KRASP01116 189 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 HLA-AP01891 365 aaKnown RBP13.51□□□□□ -0.25
ITGB1-215ENST00000488494 HIST1H1BP16401 226 aaKnown RBP13.51□□□□□ -0.25
ITGB1-215ENST00000488494 S100GP29377 79 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 G6PCP35575 357 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 ZNF585BQ52M93 769 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 FAM209BQ5JX69 171 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 LAX1Q8IWV1 398 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 OR52I2Q8NH67 350 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 PEMTQ9UBM1 199 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 U3KQK5 164 aa13.51□□□□□ -0.25
ITGB1-215ENST00000488494 SORL1Q92673 2214 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 MFSD2BA6NFX1 497 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 FRMD6-AS1P0C7T7 363 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 RNASE10Q5GAN6 216 aaKnown RBP13.5□□□□□ -0.25
ITGB1-215ENST00000488494 LPCAT3Q6P1A2 487 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 CLEC19AQ6UXS0 136 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 TBC1D26Q86UD7 250 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 CLVS1Q8IUQ0 354 aaPredicted RBP13.5□□□□□ -0.25
ITGB1-215ENST00000488494 OR10W1Q8NGF6 305 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
ITGB1-215ENST00000488494 MIXL1Q9H2W2 232 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
ITGB1-215ENST00000488494 RGS5O15539 181 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 IFNA6P05013 189 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 ARL3P36405 182 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
ITGB1-215ENST00000488494 TEX50A0A1B0GTY4 177 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 H0Y980 276 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 GGCTO75223 188 aaKnown RBP13.48□□□□□ -0.25
ITGB1-215ENST00000488494 SNAPC5O75971 98 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 CD3DP04234 171 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 TRAPPC2P0DI81 140 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 TRAPPC2BP0DI82 140 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 PGAM2P15259 253 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 PPP5CP53041 499 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 UCP3P55916 312 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
ITGB1-215ENST00000488494 GDPD1Q8N9F7 314 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 OR1L8Q8NGR8 309 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 RAB2BQ8WUD1 216 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 OR51B2Q9Y5P1 312 aa13.48□□□□□ -0.25
ITGB1-215ENST00000488494 IZUMO1RA6ND01 250 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 OR2C1O95371 312 aa13.47□□□□□ -0.25
ITGB1-215ENST00000488494 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms