RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PRH1P02810 166 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 CD74P04233 296 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 CD3DP04234 171 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 FGF2P09038 288 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 NQO2P16083 231 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 RPL27AP46776 148 aaKnown RBP10.91□□□□□ -0.66
COL9A2-208ENST00000488463 RPL8P62917 257 aaKnown RBP10.91□□□□□ -0.66
COL9A2-208ENST00000488463 DGCR2P98153 550 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 CCDC190Q86UF4 302 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 CADM3Q8N126 398 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 OR4D10Q8NGI6 311 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 OR4A5Q8NH83 315 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 DPF1Q92782 380 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 PHB2Q99623 299 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 SOSTQ9BQB4 213 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 AKIP1Q9NQ31 210 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 COA4Q9NYJ1 87 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 COMMD9Q9P000 198 aa10.91□□□□□ -0.66
COL9A2-208ENST00000488463 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
COL9A2-208ENST00000488463 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 GABARAPH6UMI1 98 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 OVOL1O14753 267 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 ACTL6BO94805 426 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 CRYGCP07315 174 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 AREGP15514 252 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 HLA-GP17693 338 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 OR2B8PP59922 312 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 MRGPRFQ96AM1 343 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 USMG5Q96IX5 58 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 FANCD2OSQ96PS1 177 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 AIFM2Q9BRQ8 373 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 TMEM140Q9NV12 185 aa10.9□□□□□ -0.66
COL9A2-208ENST00000488463 C13orf42A0A1B0GVH6 325 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 CTDSPLO15194 276 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 IGKV1-39P01597 117 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 IGKV1D-39P04432 117 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 CTRB1P17538 263 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 TBPP20226 339 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 LPAR6P43657 344 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 TSPAN5P62079 268 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 RHOGP84095 191 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 PHLDA2Q53GA4 152 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 CTRB2Q6GPI1 263 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 ACSM6Q6P461 480 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 CMTM1Q8IZ96 169 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 ARRDC1Q8N5I2 433 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 TMEM229BQ8NBD8 167 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 SMIM4Q8WVI0 70 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
COL9A2-208ENST00000488463 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
COL9A2-208ENST00000488463 ZNF257Q9Y2Q1 563 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
COL9A2-208ENST00000488463 IGLC7A0M8Q6 106 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 MPPED1O15442 326 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 INSL3P51460 131 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 AP3S2P59780 193 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 SSBP1Q04837 148 aaKnown RBP10.88□□□□□ -0.67
COL9A2-208ENST00000488463 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
COL9A2-208ENST00000488463 RNASE10Q5GAN6 216 aaKnown RBP10.88□□□□□ -0.67
COL9A2-208ENST00000488463 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 IL34Q6ZMJ4 242 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
COL9A2-208ENST00000488463 HRASLSQ9HDD0 168 aa10.88□□□□□ -0.67
COL9A2-208ENST00000488463 ANKRD34BA5PLL1 514 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 GSTZ1O43708 216 aaPredicted RBP10.87□□□□□ -0.67
COL9A2-208ENST00000488463 RPA2P15927 270 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 PSMB6P28072 239 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 PPP5CP53041 499 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 RND3P61587 244 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 TRIQKQ629K1 86 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 ZNF429Q86V71 674 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 SLC25A42Q86VD7 318 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 Q8N402 240 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
COL9A2-208ENST00000488463 PEF1Q9UBV8 284 aaKnown RBP10.87□□□□□ -0.67
COL9A2-208ENST00000488463 LSM4Q9Y4Z0 139 aaKnown RBP10.87□□□□□ -0.67
COL9A2-208ENST00000488463 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 BMPR1BO00238 502 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 OR2J3O76001 311 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 KRASP01116 189 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 G6PCP35575 357 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 TAS2R19P59542 299 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 STEAP1BQ6NZ63 245 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 DMBX1Q8NFW5 382 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 OR10W1Q8NGF6 305 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 SEC22AQ96IW7 307 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 THAP7Q9BT49 309 aaPredicted RBP10.86□□□□□ -0.67
COL9A2-208ENST00000488463 CCDC32Q9BV29 185 aa10.86□□□□□ -0.67
COL9A2-208ENST00000488463 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
COL9A2-208ENST00000488463 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms