RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 FOXE3Q13461 319 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 OR10W1Q8NGF6 305 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 ZNF580Q9UK33 172 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 TBC1D24Q9ULP9 559 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 TSSC4Q9Y5U2 329 aaPredicted RBP13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 WNK1Q9H4A3 2382 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 TEX50A0A1B0GTY4 177 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 SERPINE2P07093 398 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 UCP1P25874 307 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 RAB9AP51151 201 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 TMEM187Q14656 261 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 TRIM16LQ309B1 348 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 AKIRIN2Q53H80 203 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 CXorf66Q5JRM2 361 aaPredicted RBP13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 Q6ZRM9 215 aa13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 SELENOHQ8IZQ5 122 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-205ENST00000488072 IGHV3-11P01762 117 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ELANEP08246 267 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 P0C879 139 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ECI1P42126 302 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ERVK-16P61578 105 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 C11orf87Q6NUJ2 197 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ETV3LQ6ZN32 361 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 LINC00299Q6ZSB3 139 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 TCTEX1D1Q8N7M0 179 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 RNF152Q8N8N0 203 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 KLHL30-AS1Q8NEE0 82 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 VSTM2AQ8TAG5 236 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 S100ZQ8WXG8 99 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM222Q9H0R3 208 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 COA4Q9NYJ1 87 aa13.33□□□□□ -0.28
SHROOM1-205ENST00000488072 VWFP04275 2813 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 A0A0B4J293 547 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 NUDT19A8MXV4 375 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 M0QZ24 198 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 ACTL6BO94805 426 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 OR4A5Q8NH83 315 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 MYOZ3Q8TDC0 251 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 HINT2Q9BX68 163 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 QTRT1Q9BXR0 403 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 GON7Q9BXV9 100 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 OR51B2Q9Y5P1 312 aa13.32□□□□□ -0.28
SHROOM1-205ENST00000488072 LYRM1O43325 122 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 NDUFB6O95139 128 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 CDS2O95674 445 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 ANXA7P20073 488 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 TPPP2P59282 170 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 PPP1R1AQ13522 171 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 C2orf68Q2NKX9 166 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 ANKRD55Q3KP44 614 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 PRR31Q5SQ13 230 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM268Q5VZI3 342 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 H2BFWTQ7Z2G1 175 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
SHROOM1-205ENST00000488072 IGLC7A0M8Q6 106 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 NAP1L6A6NFF2 107 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 NXPH3O95157 252 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 TRGV3P03979 118 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 AKR1C2P52895 323 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 DHODHQ02127 395 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 LYZL2Q7Z4W2 148 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 ZNF695Q8IW36 515 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 COMMD1Q8N668 190 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 RAX2Q96IS3 184 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 S4R3C0 116 aa13.3□□□□□ -0.28
SHROOM1-205ENST00000488072 C15orf61A6NNL5 157 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 UPK1BO75841 260 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 MAS1LP35410 378 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 WT1-ASQ06250 92 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 RBMS2Q15434 407 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 SLC25A42Q86VD7 318 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 SLC35G3Q8N808 338 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 GALNT14Q96FL9 552 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM56Q96MV1 263 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 SPIN2AQ99865 258 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 SPIN2BQ9BPZ2 258 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 SLC25A21Q9BQT8 299 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 COMMD5Q9GZQ3 224 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
SHROOM1-205ENST00000488072 TRAV6A0A075B6T7 132 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 CREBL2O60519 120 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 SNAPC5O75971 98 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms