RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	PLEKHA3	Q9HB20	300 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	AUP1	Q9Y679	476 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	TEX50	A0A1B0GTY4	177 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	PMS2P5	A8MQ11	134 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	IFNA10	P01566	189 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	OR8U8	P0C7N1	319 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	FAM157C	P0CG43	387 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	S100A1	P23297	94 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	COL8A1	P27658	744 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	SULT1A2	P50226	295 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	RAB11A	P62491	216 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	FAM74A1	Q5RGS3	127 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	HAPLN4	Q86UW8	402 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	LILRB2	Q8N423	598 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	C1orf159	Q96HA4	380 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	GGACT	Q9BVM4	153 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	SPG11	Q96JI7	2443 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	IGHV3-72	A0A0B4J1Y9	119 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647		A0A1W2PN81	502 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	C15orf62	A8K5M9	175 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647		B4DSR2	109 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	TIMM23	O14925	209 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	CRYGB	P07316	175 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	GATA3	P23771	443 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	CHRNA7	P36544	502 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	F2RL1	P55085	397 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	SLC38A11	Q08AI6	406 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	DEFB113	Q30KQ7	82 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	SPINK9	Q5DT21	86 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	LDLRAD2	Q5SZI1	272 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	MRPL41	Q8IXM3	137 aa	Known RBP	11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	MMD2	Q8IY49	270 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	SCGB1C1	Q8TD33	95 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	CFHR4	Q92496	578 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	NDUFA4L2	Q9NRX3	87 aa		11.85	□□□□□ -0.51
FGFR1-222	ENST00000487647	UMAD1	C9J7I0	102 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	SLC25A17	O43808	307 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	FBXO24	O75426	580 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	VENTX	O95231	258 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	BLOC1S1	P78537	153 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	ARL16	Q0P5N6	197 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	PSG5	Q15238	335 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	SLC25A24	Q6NUK1	477 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	LHFPL4	Q7Z7J7	247 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	HSD17B11	Q8NBQ5	300 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	SLC24A4	Q8NFF2	622 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	MBD6	Q96DN6	1003 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	TMEM147	Q9BVK8	224 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	PFDN2	Q9UHV9	154 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	HILPDA	Q9Y5L2	63 aa		11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	USP9Y	O00507	2555 aa	Predicted RBP	11.84	□□□□□ -0.51
FGFR1-222	ENST00000487647	MOS	P00540	346 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	MSMB	P08118	114 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	ATP6V0C	P27449	155 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	PRSS8	Q16651	343 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	VWC2	Q2TAL6	325 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	LRRC75B	Q2VPJ9	315 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	OR8G2P	Q6IF36	304 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	THNSL2	Q86YJ6	484 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	PCNP	Q8WW12	178 aa	Known RBP	11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	RITA1	Q96K30	269 aa		11.83	□□□□□ -0.52
FGFR1-222	ENST00000487647	TRAV20	A0A0B4J274	112 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	NUDT19	A8MXV4	375 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	TRIM77	I1YAP6	450 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	ACTL6B	O94805	426 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	NPY1R	P25929	384 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	KRTAP10-9	P60411	292 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	ERH	P84090	104 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	EBI3	Q14213	229 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	SSX2	Q16385	188 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	PRSS57	Q6UWY2	283 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	ETV3L	Q6ZN32	361 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	NPB	Q8NG41	125 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	OR2T10	Q8NGZ9	312 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	PSMG3	Q9BT73	122 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	HINT2	Q9BX68	163 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	UQCC1	Q9NVA1	299 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	SIGLEC9	Q9Y336	463 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	LOXL1	Q08397	574 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	C2orf83	Q53S99	150 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	COMMD7	Q86VX2	200 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	PPP1R27	Q86WC6	154 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	OR2G3	Q8NGZ4	309 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	WDR61	Q9GZS3	305 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	PARP11	Q9NR21	331 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	METTL1	Q9UBP6	276 aa	Known RBP	11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	TIMM9	Q9Y5J7	89 aa		11.82	□□□□□ -0.52
FGFR1-222	ENST00000487647	CENPVL3	A0A0U1RRI6	287 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647		A0A1W2PRD5	423 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647		A0A1W2PRF3	423 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647		A0A1W2PRM7	423 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	RRH	O14718	337 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	NPFF	O15130	113 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	SOX15	O60248	233 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	BRS3	P32247	399 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	SNCA	P37840	140 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	DLK1	P80370	383 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms