RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 REG1AP05451 166 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 CLEC3BP05452 202 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 MYOD1P15172 320 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 HIST1H1BP16401 226 aaKnown RBP14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 GABARAPL2P60520 117 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 MRPL27Q9P0M9 148 aaKnown RBP14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 UBQLN2Q9UHD9 624 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 TRBV7-1A0A0A6YYK4 115 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 IGKV1D-13A0A0B4J2D9 117 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 UBE2CO00762 179 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 IGKV1-13P0DP09 117 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 BRWD1-AS2P59051 145 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 EIF4EBP1Q13541 118 aaPredicted RBP14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 C22orf42Q6IC83 251 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 TCTEX1D2Q8WW35 142 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 CXorf58Q96LI9 332 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 DCSTAMPQ9H295 470 aa14.42□□□□□ -0.1
SMPDL3A-202ENST00000487215 CGB1A6NKQ9 187 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 NOTOA8MTQ0 251 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 DEFA4P12838 97 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 GPR183P32249 361 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 ELLP55199 621 aaPredicted RBP14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 CDNFQ49AH0 187 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 HACD4Q5VWC8 232 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 SSX9Q7RTT3 188 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 TPRA1Q86W33 373 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 RNF183Q96D59 192 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 HSD17B10Q99714 261 aaKnown RBP14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 SPAG8Q99932 426 aaPredicted RBP14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 C5orf66Q9H5L9 145 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 SPATA2Q9UM82 520 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 UFC1Q9Y3C8 167 aa14.41□□□□□ -0.1
SMPDL3A-202ENST00000487215 IGHV3-35A0A0C4DH35 117 aa14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 FGF9P31371 208 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 RPL8P62917 257 aaKnown RBP14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 LGALS9CQ6DKI2 356 aa14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 TMEM217Q8N7C4 229 aa14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 ZNF502Q8TBZ5 544 aa14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 PHLDA1Q8WV24 401 aaPredicted RBP14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 FCGR1BQ92637 280 aa14.4□□□□□ -0.1
SMPDL3A-202ENST00000487215 KIAA1109Q2LD37 5005 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 KIR2DL5BA0A0G2JN68 375 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 KIR2DL5BA0A0G2JPC4 375 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 HLA-GP17693 338 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 ODF3L2Q3SX64 289 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 UBE2UQ5VVX9 321 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 CNIH2Q6PI25 160 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 KIR2DL5AQ8N109 375 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 MFSD4AQ8N468 514 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 STPG3Q8N7X2 389 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 KIR2DL5BQ8NHK3 375 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 GPHA2Q96T91 129 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 ZNF436Q9C0F3 470 aaPredicted RBP14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 Q9H521 79 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 TAS2R8Q9NYW2 309 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 HECTD4Q9Y4D8 3996 aa14.39□□□□□ -0.11
SMPDL3A-202ENST00000487215 TSPAN4O14817 238 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 HRASP01112 189 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 GNG2P59768 71 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 PLET1Q6UQ28 207 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 TMEM190Q8WZ59 177 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 TXNL4BQ9NX01 149 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 SSR3Q9UNL2 185 aa14.38□□□□□ -0.11
SMPDL3A-202ENST00000487215 S1PR2O95136 353 aa14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 RPL35AP18077 110 aaKnown RBP14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 PSMB9P28065 219 aa14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 ZNF66Q6ZN08 573 aa14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 NR2C2APQ86WQ0 139 aa14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 YTHDF1Q9BYJ9 559 aaKnown RBP14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 BET1LQ9NYM9 111 aa14.37□□□□□ -0.11
SMPDL3A-202ENST00000487215 IGLC7A0M8Q6 106 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 OR2B8PP59922 312 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 TIMM50Q3ZCQ8 353 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 OR4A5Q8NH83 315 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 NUDCD2Q8WVJ2 157 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 DAPK2Q9UIK4 370 aa14.36□□□□□ -0.11
SMPDL3A-202ENST00000487215 VPS13DQ5THJ4 4388 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 TGOLN2O43493 480 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 RPA2P15927 270 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 FCGR2BP31994 310 aaPredicted RBP14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 SCAND1P57086 179 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 SPARTQ8N0X7 666 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 AIFM2Q9BRQ8 373 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 MAP6D1Q9H9H5 199 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 HRASLSQ9HDD0 168 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 ANXA10Q9UJ72 324 aa14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 RRP15Q9Y3B9 282 aaKnown RBP14.35□□□□□ -0.11
SMPDL3A-202ENST00000487215 SMIM30A4D0T7 59 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 TMEM235A6NFC5 223 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 TNFSF12O43508 249 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 LAMTOR1Q6IAA8 161 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 SFXN4Q6P4A7 337 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 GALNT14Q96FL9 552 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 DAZ1Q9NQZ3 744 aaKnown RBP14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 THYN1Q9P016 225 aa14.34□□□□□ -0.11
SMPDL3A-202ENST00000487215 TRAV3A0A0B4J244 114 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 OR4C46A6NHA9 309 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 SPAG16Q8N0X2 631 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms