RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 BLCAPP62952 87 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 CX3CL1P78423 397 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 IL15RAQ13261 267 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 IAH1Q2TAA2 248 aaPredicted RBP7.57□□□□□ -1.2
MCF2L-227ENST00000486806 THOC7Q6I9Y2 204 aaKnown RBP7.57□□□□□ -1.2
MCF2L-227ENST00000486806 Q6ZS46 218 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 OR4A16Q8NH70 328 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 CLCC1Q96S66 551 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 QTRT1Q9BXR0 403 aaKnown RBP7.57□□□□□ -1.2
MCF2L-227ENST00000486806 NPFFR1Q9GZQ6 430 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 MED28Q9H204 178 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 ZNF702PQ9H963 129 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 MGAT4CQ9UBM8 478 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 ZNF257Q9Y2Q1 563 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
MCF2L-227ENST00000486806 TEX22C9J3V5 150 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 FAM90A26D6RGX4 464 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 E7EUB6 86 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 TRIM77I1YAP6 450 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 SNAPC5O75971 98 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 SIX6O95475 246 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 TRAPPC2P0DI81 140 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 TRAPPC2BP0DI82 140 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 CRIP2P52943 208 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-227ENST00000486806 PRCDQ00LT1 54 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 SRSF4Q08170 494 aaKnown RBP7.56□□□□□ -1.2
MCF2L-227ENST00000486806 TNXAQ16473 311 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 GSG1LQ6UXU4 331 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 ZBTB8BQ8NAP8 495 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-227ENST00000486806 CHAC2Q8WUX2 184 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
MCF2L-227ENST00000486806 ARPC1AQ92747 370 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 C2orf50Q96LR7 162 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 NDUFA4L2Q9NRX3 87 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-227ENST00000486806 FKBP11Q9NYL4 201 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 HSPB7Q9UBY9 170 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
MCF2L-227ENST00000486806 hCG_2014768A0A024R1R8 64 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 C13orf42A0A1B0GVH6 325 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 C5orf51A6NDU8 294 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 FAM25EA8MYX2 175 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 INS-IGF2F8WCM5 200 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 ATP6V0E1O15342 81 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 KCNAB3O43448 404 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 RBMXL2O75526 392 aaKnown RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 TSPAN9O75954 239 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 ACTL6BO94805 426 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 IGF1P05019 195 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 EGR2P11161 476 aaPredicted RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 RPL27AP46776 148 aaKnown RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 HSPE1P61604 102 aaKnown RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 GNB1P62873 340 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 ID3Q02535 119 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 FXYD3Q14802 87 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 C19orf54Q5BKX5 351 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 CXorf66Q5JRM2 361 aaPredicted RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 Q6ZSV7 163 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 SLC35E3Q7Z769 313 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 OR1L8Q8NGR8 309 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 OR1S1Q8NH92 325 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 SGMS2Q8NHU3 365 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 GRPEL2Q8TAA5 225 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 SRSF8Q9BRL6 282 aaKnown RBP7.55□□□□□ -1.2
MCF2L-227ENST00000486806 NMES1Q9C002 83 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 PRSS22Q9GZN4 317 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
MCF2L-227ENST00000486806 TEP1Q99973 2627 aaKnown RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 IGLC7A0M8Q6 106 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 NXPH3O95157 252 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 NDUFA7O95182 113 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 OPN1MWP04001 364 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 OPN1MW2P0DN77 364 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 OPN1MW3P0DN78 364 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 BCAP31P51572 246 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 SPCS3P61009 180 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 SRSF2Q01130 221 aaKnown RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 ASB13Q8WXK3 278 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 FAM103A1Q9BTL3 118 aaKnown RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 PDCD10Q9BUL8 212 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 ZNF436Q9C0F3 470 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 PARP11Q9NR21 331 aa7.54□□□□□ -1.2
MCF2L-227ENST00000486806 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
MCF2L-227ENST00000486806 MSGN1A6NI15 193 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 AP4M1O00189 453 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 CNIH1O95406 144 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms