RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 BAXQ07812 192 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 C17orf58Q2M2W7 97 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF585BQ52M93 769 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 FBLN7Q53RD9 439 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 NCR3LG1Q68D85 454 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 TMEM219Q86XT9 240 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 TPRX1Q8N7U7 411 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 C8orf31Q8N9H6 132 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 DMBX1Q8NFW5 382 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 OR5R1Q8NH85 324 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 RFESDQ8TAC1 157 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 C11orf1Q9H5F2 150 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 CYTL1Q9NRR1 136 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 SDHAF2Q9NX18 166 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 PSG11Q9UQ72 335 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 PRELID3BQ9Y3B1 194 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 PLXNB1O43157 2135 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1W2PPH5 198 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 TOR1AO14656 332 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RAB29O14966 203 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 NMBP08949 121 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RRASP10301 218 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 LPAR6P43657 344 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RPL23AP62750 156 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RPL31P62899 125 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 LRRC75BQ2VPJ9 315 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 NSUN5P1Q3KNT7 163 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 TMEM95Q3KNT9 176 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 TCF23Q7RTU1 214 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 FOXRED2Q8IWF2 684 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 SPAG16Q8N0X2 631 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 OR2C3Q8N628 320 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 UBAC2Q8NBM4 344 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 UBALD1Q8TB05 177 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 TCTEX1D2Q8WW35 142 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 CFHR4Q92496 578 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 GPR146Q96CH1 333 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 AIFM2Q9BRQ8 373 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 ABHD14AQ9BUJ0 271 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 PARP12Q9H0J9 701 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF702PQ9H963 129 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 LYRM2Q9NU23 88 aaPredicted RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 SERTAD4Q9NUC0 356 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 PFDN2Q9UHV9 154 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RNF150Q9ULK6 438 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 RCL1Q9Y2P8 373 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 WSB1Q9Y6I7 421 aa7.51□□□□□ -1.21
TMEM39A-208ENST00000486159 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 MMP23AO75900 390 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 HPRT1P00492 218 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 IGKV1-39P01597 117 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 IGKV1-5P01602 117 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 IGKV1D-39P04432 117 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 P0C879 139 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 DUTP33316 252 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 THBS3P49746 956 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 BLCAPP62952 87 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF266Q14584 549 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 FAM71F2Q6NXP2 309 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 RNF141Q8WVD5 230 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 SAT2Q96F10 170 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 SMIM8Q96KF7 97 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF714Q96N38 554 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 ARV1Q9H2C2 271 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 IFI27L2Q9H2X8 130 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 SESN1Q9Y6P5 492 aa7.5□□□□□ -1.21
TMEM39A-208ENST00000486159 IGHV3-43A0A0B4J1X8 118 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 A6NDX4 124 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 LEUTXA8MZ59 168 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 FGF16O43320 207 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 SYNGR2O43760 224 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 DFFBO76075 338 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 RBP4P02753 201 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 OPN1MWP04001 364 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 ARG1P05089 322 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 OPN1MW2P0DN77 364 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 OPN1MW3P0DN78 364 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 IGHV3-43DP0DP04 118 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 CD24P25063 80 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 RAB5CP51148 216 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 POLR2GP62487 172 aaKnown RBP eCLIP7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 SSX2Q16385 188 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 AARDQ4LEZ3 155 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 CXorf66Q5JRM2 361 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 UTF1Q5T230 341 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 SLC25A48Q6ZT89 311 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 H2BFWTQ7Z2G1 175 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 COMMD7Q86VX2 200 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 STX12Q86Y82 276 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 EIF4E3Q8N5X7 224 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 LINC00311Q8N616 119 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF439Q8NDP4 499 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 OR4S2Q8NH73 311 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms