RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SDCBPO00560 298 aaPredicted RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 HIST1H1CP16403 213 aaKnown RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 MSNP26038 577 aaKnown RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 RUNX1Q01196 453 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 SLAMF1Q13291 335 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 JOSD1Q15040 202 aaPredicted RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 HLA-DRB5Q30154 266 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 Q3ZCU0 254 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 RIBC1Q8N443 379 aaPredicted RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 LINC00526Q96FQ7 95 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 SERPINI1Q99574 410 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 NSRP1Q9H0G5 558 aaKnown RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 C1orf109Q9NX04 203 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 CD300AQ9UGN4 299 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 SYNRGQ9UMZ2 1314 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 SETXQ7Z333 2677 aaKnown RBP0.12□□□□□ -2.39
CCDC66-219ENST00000484441 AKAP13Q12802 2813 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
CCDC66-219ENST00000484441 TMEM269A0A1B0GVZ9 245 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 MKRN2OSH3BPM6 223 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 COX7A2LO14548 114 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 ITGB1BP1O14713 200 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 NSA2O95478 260 aaKnown RBP0.12□□□□□ -2.39
CCDC66-219ENST00000484441 UBBP0CG47 229 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 ZNHIT3Q15649 155 aaPredicted RBP0.12□□□□□ -2.39
CCDC66-219ENST00000484441 SAPCD1Q5SSQ6 148 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 ATP6V1C2Q8NEY4 427 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 AQP3Q92482 292 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 GNPNAT1Q96EK6 184 aaPredicted RBP0.12□□□□□ -2.39
CCDC66-219ENST00000484441 SIKE1Q9BRV8 207 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 YIPF3Q9GZM5 350 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 TIMM22Q9Y584 194 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 TRANK1O15050 2925 aa0.12□□□□□ -2.39
CCDC66-219ENST00000484441 FLNCQ14315 2725 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 A0A087WX48 190 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 CCRL2O00421 344 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 RPL30P62888 115 aaKnown RBP0.11□□□□□ -2.39
CCDC66-219ENST00000484441 ZNF345Q14585 488 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 OR4C6Q8NH72 309 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 SLC37A2Q8TED4 501 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 OBSCN-AS1Q96MR7 158 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 HES4Q9HCC6 221 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 AGPAT3Q9NRZ7 376 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 BAIAP2Q9UQB8 552 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 PRELID1Q9Y255 219 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 TNRC6AQ8NDV7 1962 aaKnown RBP0.11□□□□□ -2.39
CCDC66-219ENST00000484441 FAT3Q8TDW7 4589 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 MUC12Q9UKN1 5478 aa0.11□□□□□ -2.39
CCDC66-219ENST00000484441 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
CCDC66-219ENST00000484441 CNTRLQ7Z7A1 2325 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 ATRQ13535 2644 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 TMEM212A6NML5 194 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 S100A9P06702 114 aaKnown RBP0.1□□□□□ -2.39
CCDC66-219ENST00000484441 ZNF846Q147U1 533 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 CDK10Q15131 360 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 NDUFA5Q16718 116 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 DNAL1Q4LDG9 190 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 Q8N6K4 173 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 SGMS2Q8NHU3 365 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 ASB13Q8WXK3 278 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 MED10Q9BTT4 135 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 FAM208BQ5VWN6 2430 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 USH2AO75445 5202 aa0.1□□□□□ -2.39
CCDC66-219ENST00000484441 COL4A5P29400 1685 aa0.09□□□□□ -2.39
CCDC66-219ENST00000484441 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.39
CCDC66-219ENST00000484441 NBEAL1Q6ZS30 2694 aa0.09□□□□□ -2.39
CCDC66-219ENST00000484441 MEGF8Q7Z7M0 2845 aa0.09□□□□□ -2.39
CCDC66-219ENST00000484441 TRBV6-7A0A0A0MS04 114 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 LEPROTO15243 131 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 STX10O60499 249 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 KRT75O95678 551 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 PRH1P02810 166 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 CD40LGP29965 261 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 FXYD2P54710 66 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 SPATA8Q6RVD6 105 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 OR8D2Q9GZM6 311 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 SLC22A4Q9H015 551 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 HRASLSQ9HDD0 168 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 OR5AC2Q9NZP5 309 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 HERC2O95714 4834 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 MYO9AB2RTY4 2548 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 DNHD1Q96M86 4753 aa0.09□□□□□ -2.4
CCDC66-219ENST00000484441 BIRC6Q9NR09 4857 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 CEP290O15078 2479 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 TRAV14DV4A0A0A6YYC5 116 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 NEMFO60524 1076 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 PMP2P02689 132 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 SHBGP04278 402 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 IL6P05231 212 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 SBSNQ6UWP8 590 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 ZNF676Q8N7Q3 588 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 OR7G1Q8NGA0 311 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 ANKRD36BP1Q96IX9 119 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 EURLQ9NYK6 297 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 PDZD2O15018 2839 aa0.08□□□□□ -2.4
CCDC66-219ENST00000484441 IGF2RP11717 2491 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 ITPR3Q14573 2671 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 MTORP42345 2549 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms