RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 AP2S1P53680 142 aaPredicted RBP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 POLR2GP62487 172 aaKnown RBP eCLIP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 CAV1Q03135 178 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 MLLT11Q13015 90 aaPredicted RBP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 COTL1Q14019 142 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 ACSM3Q53FZ2 586 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 SAPCD1Q5SSQ6 148 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 C9orf64Q5T6V5 341 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 LRRN1Q6UXK5 716 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 ZNF705AQ6ZN79 300 aaPredicted RBP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 SSX8Q7RTT4 187 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 ZNF550Q7Z398 422 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 COMMD7Q86VX2 200 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 RPS19BP1Q86WX3 136 aaKnown RBP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 VCX3BQ9H321 246 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 MAP1LC3AQ9H492 121 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 CST9LQ9H4G1 147 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 GPR84Q9NQS5 396 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 FGFR1OP2Q9NVK5 253 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 RSL24D1Q9UHA3 163 aaKnown RBP0.51□□□□□ -2.33
SCAF11-207ENST00000484275 C3orf18Q9UK00 162 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 PLXND1Q9Y4D7 1925 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 ATP6V1DQ9Y5K8 247 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 PXMP4Q9Y6I8 212 aa0.51□□□□□ -2.33
SCAF11-207ENST00000484275 ZNF106Q9H2Y7 1883 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 IGKV2-40A0A087WW87 121 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 A0A0D9SEW6 157 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MEIS3P1A6NDR6 274 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 OR51F1A6NGY5 319 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 LST1O00453 97 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 ACOX3O15254 700 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 PLA2G10O15496 165 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 NOS1APO75052 506 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CIAO1O76071 339 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 IGKV2D-40P01614 121 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 C1QAP02745 245 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CCL1P22362 96 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 NFYAP23511 347 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MSNP26038 577 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CCR2P41597 374 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RPL28P46779 137 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MARCKSL1P49006 195 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RAB13P51153 203 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 BLVRAP53004 296 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RAB14P61106 215 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MAGOHP61326 146 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 NAA20P61599 178 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RPL30P62888 115 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 TNFAIP6P98066 277 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 EMX1Q04741 257 aaPredicted RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 FABP9Q0Z7S8 132 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 ELOBQ15370 118 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RSU1Q15404 277 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 NNATQ16517 81 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 NDUFA5Q16718 116 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 TMEM155Q4W5P6 130 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 C1orf194Q5T5A4 169 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 C1orf195Q5TG92 126 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CD200R1LQ6Q8B3 271 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 C7orf65Q6ZTY9 151 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 HIST2H3AQ71DI3 136 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 TBC1D19Q8N5T2 526 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 DEFB125Q8N687 156 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 GPR32P1Q8NGA4 272 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 SGMS2Q8NHU3 365 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 OPTNQ96CV9 577 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 DIRAS2Q96HU8 199 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 IMMP2LQ96T52 175 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 RETNLBQ9BQ08 111 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 LLPHQ9BRT6 129 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CHST6Q9GZX3 395 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CXorf21Q9HAI6 301 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MED9Q9NWA0 146 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 COQ4Q9Y3A0 265 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 INTS1Q8N201 2190 aaKnown RBP0.5□□□□□ -2.33
SCAF11-207ENST00000484275 EML6Q6ZMW3 1958 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 CEP192Q8TEP8 1941 aa0.5□□□□□ -2.33
SCAF11-207ENST00000484275 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 FREM1Q5H8C1 2179 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 EXPH5Q8NEV8 1989 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 TRBV6-5A0A0K0K1A5 114 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 TRBV10-2A0A0K0K1G8 114 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 TMEM269A0A1B0GVZ9 245 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 IRGMA1A4Y4 181 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 TRAPPC13A5PLN9 417 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 C21orf140B9A014 251 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 H0Y980 276 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 H3BT86 120 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 LEPROTO15243 131 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 MRPS14O60783 128 aaKnown RBP0.49□□□□□ -2.33
SCAF11-207ENST00000484275 ZNF737O75373 536 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 DCTN3O75935 186 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 DEXIO95424 95 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 NSA2O95478 260 aaKnown RBP0.49□□□□□ -2.33
SCAF11-207ENST00000484275 CRPP02741 224 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 PPBPP02775 128 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 REG1AP05451 166 aa0.49□□□□□ -2.33
SCAF11-207ENST00000484275 RPSAP08865 295 aaKnown RBP0.49□□□□□ -2.33
SCAF11-207ENST00000484275 SRP19P09132 144 aaKnown RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms