RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MRPL51Q4U2R6 128 aaKnown RBP2.88□□□□□ -1.95
PTCD3-214ENST00000483925 C10orf91Q5T1B1 145 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 LYZL2Q7Z4W2 148 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 RPRMLQ8N4K4 120 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 NUP35Q8NFH5 326 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 UBALD1Q8TB05 177 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 MND1Q9BWT6 205 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 LINC00574Q9H8X3 128 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 RNF122Q9H9V4 155 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 RASL12Q9NYN1 266 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 MED11Q9P086 117 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 ITGB4P16144 1822 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 IGSF9BQ9UPX0 1349 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 IGLV3-10A0A075B6K4 115 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 BET1O15155 118 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 SLC25A20O43772 301 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-214ENST00000483925 IL4P05112 153 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 CSN2P05814 226 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BOP23527 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 S100A7P31151 101 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BBP33778 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 RPL27AP46776 148 aaKnown RBP2.87□□□□□ -1.95
PTCD3-214ENST00000483925 GABRA2P47869 451 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 PIGPP57054 158 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BDP58876 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 TAS2R20P59543 309 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BCP62807 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 PSPHP78330 225 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 FUT5Q11128 374 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST2H2BEQ16778 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-214ENST00000483925 RPL22L1Q6P5R6 122 aaKnown RBP2.87□□□□□ -1.95
PTCD3-214ENST00000483925 SSX8Q7RTT4 187 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 TCF24Q7RTU0 167 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ANGPTL5Q86XS5 388 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF561Q8N587 486 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 TMEM105Q8N8V8 129 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 DAND5Q8N907 189 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 APCDD1LQ8NCL9 501 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ST6GALNAC3Q8NDV1 305 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 BPIFB6Q8NFQ5 453 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 FNDC9Q8TBE3 224 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BHQ93079 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 CAPZA3Q96KX2 299 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 FOPNLQ96NB1 174 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BNQ99877 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BMQ99879 126 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 XAGE1AQ9HD64 81 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 JPT1Q9UK76 154 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ASB4Q9Y574 426 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ICOSQ9Y6W8 199 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 CEP152O94986 1710 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 ABCC12Q96J65 1359 aa2.87□□□□□ -1.95
PTCD3-214ENST00000483925 NAV1Q8NEY1 1877 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 ARAP1Q96P48 1450 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 A0A087WUU8 490 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 BORCS7-ASMTA0A0B4J1R7 106 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 TRAV38-1A0A0B4J264 116 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 DUXBA0A1W2PPF3 345 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 DHRS12A0PJE2 317 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 GRIFINA4D1Z8 144 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 A8MWP6 167 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CLDN25C9JDP6 229 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 I3L521 148 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 IGKV3-15P01624 115 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 IGLV7-43P04211 117 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 INAFM2P0DMQ5 153 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 GZMHP20718 246 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CRYBB3P26998 211 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CSN1S1P47710 185 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 TSPEAR-AS2P59090 65 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 DEFA3P59666 94 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 RPL30P62888 115 aaKnown RBP2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CCL20P78556 96 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF816Q0VGE8 651 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CROCCP2Q86T23 111 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 SAXO1Q8IYX7 474 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 LYG1Q8N1E2 194 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 LINC00612Q8N6U2 182 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF709Q8N972 641 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 THEM6Q8WUY1 208 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 RNASE6Q93091 150 aaKnown RBP2.86□□□□□ -1.95
PTCD3-214ENST00000483925 CCDC115Q96NT0 180 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 DOHHQ9BU89 302 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 MEGF6O75095 1541 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 TSPOAP1O95153 1857 aa2.86□□□□□ -1.95
PTCD3-214ENST00000483925 ERCC6Q03468 1493 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 H3BMM0 161 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 LECT2O14960 151 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 DEGS1O15121 323 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 SLC25A16P16260 332 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 AZU1P20160 251 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 NPY1RP25929 384 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 CASP1P29466 404 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 BAMBIQ13145 260 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 HTR4Q13639 388 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 SMIM21Q3B7S5 101 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 LGALS9BQ3B8N2 356 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms