RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 APELAP0DMC3 54 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 HLA-GP17693 338 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 FAM219AQ8IW50 185 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 CADM3Q8N126 398 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 OR10C1Q96KK4 312 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 TMED3Q9Y3Q3 217 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 TEX50A0A1B0GTY4 177 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 A0A1B0GW64 132 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 C15orf61A6NNL5 157 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 Q8N2B8 174 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 ABHD5Q8WTS1 349 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 SRSF12Q8WXF0 261 aaKnown RBP11.14□□□□□ -0.63
SRSF6-202ENST00000483871 PARP11Q9NR21 331 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 TMEM14BQ9NUH8 114 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
SRSF6-202ENST00000483871 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 HMX3A6NHT5 357 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 MSGN1A6NI15 193 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 FAM25EA8MYX2 175 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 SSNA1O43805 119 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 COMPP49747 757 aaPredicted RBP11.13□□□□□ -0.63
SRSF6-202ENST00000483871 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 SPINK9Q5DT21 86 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 LINC01006Q8NI28 216 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 FYTTD1Q96QD9 318 aaKnown RBP11.13□□□□□ -0.63
SRSF6-202ENST00000483871 COMMD5Q9GZQ3 224 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
SRSF6-202ENST00000483871 G3V318 75 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 SIX6O95475 246 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 IFNA21P01568 189 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 SULT1A3P0DMM9 295 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 SULT1A4P0DMN0 295 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
SRSF6-202ENST00000483871 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 OR2T6Q8NHC8 308 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 HINT2Q9BX68 163 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.12□□□□□ -0.63
SRSF6-202ENST00000483871 PRNDQ9UKY0 176 aa11.12□□□□□ -0.63
SRSF6-202ENST00000483871 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
SRSF6-202ENST00000483871 FBN1P35555 2871 aaKnown RBP11.12□□□□□ -0.63
SRSF6-202ENST00000483871 A0A1B0GU03 582 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 GOSR2O14653 212 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 KCNAB3O43448 404 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 PITX3O75364 302 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 HKR1P10072 659 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 MDKP21741 143 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 MAS1LP35410 378 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 VDAC2P45880 294 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 SMCO1Q147U7 214 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 C16orf95Q9H693 158 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 NDUFA7O95182 113 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 IFNA17P01571 189 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 ECSCRQ19T08 205 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 IAH1Q2TAA2 248 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 CXorf66Q5JRM2 361 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-202ENST00000483871 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 C10orf99Q6UWK7 81 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 Q6ZNX1 250 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 OR1L8Q8NGR8 309 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 NDUFA4L2Q9NRX3 87 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
SRSF6-202ENST00000483871 AP4M1O00189 453 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 IGF1P05019 195 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 CXCL3P19876 107 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
SRSF6-202ENST00000483871 C11orf87Q6NUJ2 197 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 STPG2Q8N412 459 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 OR5B3Q8NH48 314 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
SRSF6-202ENST00000483871 HAX1O00165 279 aa11.09□□□□□ -0.63
SRSF6-202ENST00000483871 REG1AP05451 166 aa11.09□□□□□ -0.63
SRSF6-202ENST00000483871 FGF2P09038 288 aa11.09□□□□□ -0.63
SRSF6-202ENST00000483871 TRAPPC2P0DI81 140 aa11.09□□□□□ -0.63
SRSF6-202ENST00000483871 TRAPPC2BP0DI82 140 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms