RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 Q6ZS46 218 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 HSD17B13Q7Z5P4 300 aaPredicted RBP12.11□□□□□ -0.47
CCM2-215ENST00000482714 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 RNASE11Q8TAA1 199 aaKnown RBP12.11□□□□□ -0.47
CCM2-215ENST00000482714 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 HSPB9Q9BQS6 159 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
CCM2-215ENST00000482714 A0A1B0GU03 582 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 IFNA21P01568 189 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
CCM2-215ENST00000482714 TNXAQ16473 311 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 AARDQ4LEZ3 155 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 NMSQ5H8A3 153 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
CCM2-215ENST00000482714 OR1L8Q8NGR8 309 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 OR52E5Q8NH55 327 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 GPR146Q96CH1 333 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 TPSG1Q9NRR2 321 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
CCM2-215ENST00000482714 RNF114Q9Y508 228 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
CCM2-215ENST00000482714 A0A0B4J293 547 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 SH2D7A6NKC9 451 aaPredicted RBP12.09□□□□□ -0.47
CCM2-215ENST00000482714 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
CCM2-215ENST00000482714 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
CCM2-215ENST00000482714 SLC35B1P78383 322 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 STPG2Q8N412 459 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
CCM2-215ENST00000482714 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
CCM2-215ENST00000482714 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 LINC01548A6NM66 108 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 BRI3O95415 125 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 EGR2P11161 476 aaPredicted RBP12.08□□□□□ -0.47
CCM2-215ENST00000482714 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.47
CCM2-215ENST00000482714 CENPVQ7Z7K6 275 aaPredicted RBP12.08□□□□□ -0.47
CCM2-215ENST00000482714 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.47
CCM2-215ENST00000482714 MDFIQ99750 246 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.47
CCM2-215ENST00000482714 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 ATP6V0E1O15342 81 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 RBMXL2O75526 392 aaKnown RBP12.08□□□□□ -0.48
CCM2-215ENST00000482714 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 SPNP16150 400 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 PROK1P58294 105 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 OR2B8PP59922 312 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 GNB1P62873 340 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
CCM2-215ENST00000482714 Q6ZRM9 215 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 OR52B4Q8NGK2 314 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 SEC22CQ9BRL7 303 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
CCM2-215ENST00000482714 TRAV41A0A0B4J266 112 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 C7orf66A4D0T2 115 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 INS-IGF2F8WCM5 200 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 HOXB5P09067 269 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
CCM2-215ENST00000482714 PPIFP30405 207 aaKnown RBP12.07□□□□□ -0.48
CCM2-215ENST00000482714 SMCO1Q147U7 214 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 QTRT1Q9BXR0 403 aaKnown RBP12.07□□□□□ -0.48
CCM2-215ENST00000482714 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
CCM2-215ENST00000482714 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 A0A1W2PN81 502 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 PITX3O75364 302 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 CHRNA7P36544 502 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 SPCS3P61009 180 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 NDPQ00604 133 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 TATDN3Q17R31 274 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 AWAT1Q58HT5 328 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 TEX38Q6PEX7 206 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 UNQ5815/PRO19632Q6UWF5 114 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 TTC9CQ8N5M4 171 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 WIPF2Q8TF74 440 aaPredicted RBP12.06□□□□□ -0.48
CCM2-215ENST00000482714 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 NSG2Q9Y328 171 aa12.06□□□□□ -0.48
CCM2-215ENST00000482714 E7EUB6 86 aa12.05□□□□□ -0.48
CCM2-215ENST00000482714 H3BUA1 57 aa12.05□□□□□ -0.48
CCM2-215ENST00000482714 LY86O95711 162 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms