RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 COX7A2P2O60397 106 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 PPIAL4FP0DN26 164 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 SRSF7Q16629 238 aaKnown RBP eCLIP7.61□□□□□ -1.19
CALD1-220ENST00000482470 KRTAP27-1Q3LI81 207 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 ZNF474Q6S9Z5 364 aaPredicted RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 SGMS2Q8NHU3 365 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 CORO2AQ92828 525 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 PLSCR4Q9NRQ2 329 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 PPIAL4AQ9Y536 164 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 IGKV3-15P01624 115 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 REG1AP05451 166 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 OR10J1P30954 320 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 SUMO1P63165 101 aaKnown RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 PMS2P11Q13670 270 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 HCP5Q6MZN7 132 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 DUX4L9Q6RFH8 374 aaPredicted RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 C1orf162Q8NEQ5 155 aaPredicted RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 FLYWCH2Q96CP2 140 aaKnown RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 SNRNP40Q96DI7 357 aaKnown RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 FAM103A1Q9BTL3 118 aaKnown RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 MS4A5Q9H3V2 200 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 NOTCH3Q9UM47 2321 aa7.61□□□□□ -1.19
CALD1-220ENST00000482470 ANKRD11Q6UB99 2663 aaPredicted RBP7.61□□□□□ -1.19
CALD1-220ENST00000482470 IGKV1D-17A0A075B6S4 117 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SEC14L6B5MCN3 397 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 UBE2CO00762 179 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 GFI1BQ5VTD9 330 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 TRBV6-6A0A0A6YYG2 114 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 CA2P00918 260 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
CALD1-220ENST00000482470 TAS2R45P59539 299 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 HSPE1P61604 102 aaKnown RBP7.6□□□□□ -1.19
CALD1-220ENST00000482470 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 PACRGQ96M98 296 aaPredicted RBP7.6□□□□□ -1.19
CALD1-220ENST00000482470 HES4Q9HCC6 221 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
CALD1-220ENST00000482470 HSPB7Q9UBY9 170 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SLC25A15Q9Y619 301 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SAA2-SAA4A0A096LPE2 208 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 IGHG3P01860 377 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 FAM87AP0C7U9 286 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SAA2P0DJI9 122 aaPredicted RBP7.6□□□□□ -1.19
CALD1-220ENST00000482470 ERVK11-1P61568 191 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 OR4A47Q6IF82 309 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 TGIF2LYQ8IUE0 185 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 Q8NFD4 153 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 ADTRPQ96IZ2 230 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SGK494Q96LW2 274 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 ONECUT1Q9UBC0 465 aa7.6□□□□□ -1.19
CALD1-220ENST00000482470 SRRM5B3KS81 715 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 FAM157AC9JC47 383 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 IL3RAP26951 378 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 KIR2DS2P43631 304 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 ELOBQ15370 118 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 TNXAQ16473 311 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 SPNS3Q6ZMD2 512 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 FAM90A1Q86YD7 464 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 IDI2-AS1Q9NZ38 188 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 SLC25A17O43808 307 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 KBTBD11O94819 623 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 BSPH1Q075Z2 132 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 HAPLN4Q86UW8 402 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 ZNF714Q96N38 554 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 ELOVL1Q9BW60 279 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 SDF2L1Q9HCN8 221 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 ASCL3Q9NQ33 180 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 ZNF835Q9Y2P0 537 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 FAM208BQ5VWN6 2430 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 SPTBN4Q9H254 2564 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 KBTBD11-OT1A0A1B0GTJ5 212 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 LYNX1G3V0Z9 82 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 K7EM74 188 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 EREGO14944 169 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 LYNX1P0DP58 116 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 TMEM11P17152 192 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 IGFBP2P18065 325 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 NTF3P20783 257 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 GNG4P50150 75 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 UBE2L3P68036 154 aaKnown RBP7.59□□□□□ -1.19
CALD1-220ENST00000482470 ZNF705AQ6ZN79 300 aaPredicted RBP7.59□□□□□ -1.19
CALD1-220ENST00000482470 LINC01560Q8TB33 94 aa7.59□□□□□ -1.19
CALD1-220ENST00000482470 CHD3Q12873 2000 aaKnown RBP7.59□□□□□ -1.19
CALD1-220ENST00000482470 PLXNB1O43157 2135 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 CHD8Q9HCK8 2581 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 LOC102724200A0A096LPH7 203 aaPredicted RBP7.59□□□□□ -1.2
CALD1-220ENST00000482470 PPIHO43447 177 aaKnown RBP7.59□□□□□ -1.2
CALD1-220ENST00000482470 VMA21Q3ZAQ7 101 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 KRTCAP3Q53RY4 240 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 SPRNQ5BIV9 151 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 TCTEX1D1Q8N7M0 179 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 P2RX4Q99571 388 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 GOLT1BQ9Y3E0 138 aa7.59□□□□□ -1.2
CALD1-220ENST00000482470 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
CALD1-220ENST00000482470 ACACBO00763 2458 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms