RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ANAPC10Q9UM13 185 aa15.2■□□□□ 0.02
MSH5-215ENST00000482280 BMPR1BO00238 502 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 GPR31O00270 319 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 UPK2O00526 184 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 RBMXL2O75526 392 aaKnown RBP15.19■□□□□ 0.02
MSH5-215ENST00000482280 SNAPC5O75971 98 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 S1PR2O95136 353 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 F2RP25116 425 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 POU2AF1Q16633 256 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 THOC7Q6I9Y2 204 aaKnown RBP15.19■□□□□ 0.02
MSH5-215ENST00000482280 CXorf58Q96LI9 332 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 SRSF8Q9BRL6 282 aaKnown RBP15.19■□□□□ 0.02
MSH5-215ENST00000482280 SIGLEC8Q9NYZ4 499 aa15.19■□□□□ 0.02
MSH5-215ENST00000482280 HPGDSO60760 199 aa15.18■□□□□ 0.02
MSH5-215ENST00000482280 PGLYRP1O75594 196 aaPredicted RBP15.18■□□□□ 0.02
MSH5-215ENST00000482280 REG1AP05451 166 aa15.18■□□□□ 0.02
MSH5-215ENST00000482280 CRYGCP07315 174 aa15.18■□□□□ 0.02
MSH5-215ENST00000482280 ARL3P36405 182 aa15.18■□□□□ 0.02
MSH5-215ENST00000482280 HSD17B13Q7Z5P4 300 aaPredicted RBP15.18■□□□□ 0.02
MSH5-215ENST00000482280 GPX8Q8TED1 209 aa15.18■□□□□ 0.02
MSH5-215ENST00000482280 DGCR14Q96DF8 476 aaKnown RBP15.18■□□□□ 0.02
MSH5-215ENST00000482280 QTRT1Q9BXR0 403 aaKnown RBP15.18■□□□□ 0.02
MSH5-215ENST00000482280 MARCH11A6NNE9 402 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 IFNA6P05013 189 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 CSN3P07498 182 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 FGF2P09038 288 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 RPA2P15927 270 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 CTRB1P17538 263 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 ELK1P19419 428 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 LPAR6P43657 344 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 OR2B8PP59922 312 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 FAM106AQ4KMX7 169 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 CTRB2Q6GPI1 263 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 OR2K2Q8NGT1 345 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 C15orf40Q8WUR7 153 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 TUBA4BQ9H853 241 aa15.17■□□□□ 0.02
MSH5-215ENST00000482280 TRBV7-1A0A0A6YYK4 115 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 PPP5D1E7EU14 171 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 E7EUB6 86 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 KRASP01116 189 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 IGHV3-23P01764 117 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 TRAPPC2P0DI81 140 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 TRAPPC2BP0DI82 140 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 IGHV4-30-4P0DP06 118 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 ZNF182P17025 639 aaPredicted RBP15.16■□□□□ 0.02
MSH5-215ENST00000482280 PHLDA2Q53GA4 152 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 GPR107Q5VW38 600 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 CLEC19AQ6UXS0 136 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 GPR141Q7Z602 305 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 SBSPONQ8IVN8 264 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 HINT2Q9BX68 163 aa15.16■□□□□ 0.02
MSH5-215ENST00000482280 ZNF320A2RRD8 509 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 GABARAPO95166 117 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 NDUFB8O95169 186 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 OR2C1O95371 312 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 MYOD1P15172 320 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 IL34Q6ZMJ4 242 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 C19orf35Q6ZS72 473 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 LYSMD2Q8IV50 215 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 SLC38A6Q8IZM9 456 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 OR1L8Q8NGR8 309 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 FCAMRQ8WWV6 532 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 TSC22D3Q99576 134 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
MSH5-215ENST00000482280 FXYD6Q9H0Q3 95 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 FKBP11Q9NYL4 201 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 S4R3C0 116 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 DNAH3Q8TD57 4116 aa15.15■□□□□ 0.02
MSH5-215ENST00000482280 MECP2P51608 486 aaKnown RBP15.14■□□□□ 0.01
MSH5-215ENST00000482280 RCHY1Q96PM5 261 aa15.14■□□□□ 0.01
MSH5-215ENST00000482280 FANCD2OSQ96PS1 177 aa15.14■□□□□ 0.01
MSH5-215ENST00000482280 EXTL2Q9UBQ6 330 aa15.14■□□□□ 0.01
MSH5-215ENST00000482280 PRNDQ9UKY0 176 aa15.14■□□□□ 0.01
MSH5-215ENST00000482280 SORL1Q92673 2214 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 IGLV11-55A0A075B6I3 123 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 TRAV3A0A0B4J244 114 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 A0A1B0GW64 132 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 LGALS9O00182 355 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 HLA-AP01891 365 aaKnown RBP15.13■□□□□ 0.01
MSH5-215ENST00000482280 OR13C7P0DN81 318 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 G6PCP35575 357 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 RNASE12Q5GAN4 147 aaKnown RBP15.13■□□□□ 0.01
MSH5-215ENST00000482280 RNASE10Q5GAN6 216 aaKnown RBP15.13■□□□□ 0.01
MSH5-215ENST00000482280 GPHB5Q86YW7 130 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 LSM10Q969L4 123 aaKnown RBP15.13■□□□□ 0.01
MSH5-215ENST00000482280 TMEM56Q96MV1 263 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 SLC2A8Q9NY64 477 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 OR51B2Q9Y5P1 312 aa15.13■□□□□ 0.01
MSH5-215ENST00000482280 IGLC7A0M8Q6 106 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 RGS5O15539 181 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 SERPINE2P07093 398 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 SMIM18P0DKX4 95 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 PGAM2P15259 253 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 CTF1Q16619 201 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 GUCA2BQ16661 112 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 SLC25A24Q6NUK1 477 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 TBC1D26Q86UD7 250 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 LAX1Q8IWV1 398 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 GDPD1Q8N9F7 314 aa15.12■□□□□ 0.01
MSH5-215ENST00000482280 CCDC140Q96MF4 163 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms