RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	FABP5P3	A8MUU1	101 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	EVPLL	A8MZ36	301 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173		I3L521	148 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	PIR	O00625	290 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	BHLHE40	O14503	412 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SLC22A1	O15245	554 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	GNRH2	O43555	120 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	LYPLA2	O95372	231 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SERPINA1	P01009	418 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	HLA-DRB1	P01911	266 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	C1QA	P02745	245 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	TTR	P02766	147 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	IFNA6	P05013	189 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SERPINA7	P05543	415 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	RBP1	P09455	135 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SULT1A3	P0DMM9	295 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SULT1A4	P0DMN0	295 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	FGF6	P10767	208 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	S100A4	P26447	101 aa	Known RBP	0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CRYBB3	P26998	211 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CA5A	P35218	305 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	MAP2K4	P45985	399 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SERPINB10	P48595	397 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	ARF6	P62330	175 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF90	Q03938	601 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CDK10	Q15131	360 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	LIN52	Q52LA3	116 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM97	Q5BJF2	176 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	IBA57	Q5T440	356 aa	Known RBP	0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SYPL2	Q5VXT5	272 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPL22L1	Q6P5R6	122 aa	Known RBP	0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	DPPA3	Q6W0C5	159 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SSX8	Q7RTT4	187 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	TRAPPC6B	Q86SZ2	158 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OOSP2	Q86WS3	158 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPS19BP1	Q86WX3	136 aa	Known RBP	0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	GPHB5	Q86YW7	130 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR6V1	Q8N148	313 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	C1orf158	Q8N1D5	194 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	UMODL1-AS1	Q8N2C9	162 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SLC35F6	Q8N357	371 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	C10orf126	Q8N4M7	172 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	ANKRD29	Q8N6D5	301 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF283	Q8N7M2	679 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR51D1	Q8NGF3	324 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR8B12	Q8NGG6	310 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR1L8	Q8NGR8	309 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CLDND2	Q8NHS1	167 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	GNPDA2	Q8TDQ7	276 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SMCR5	Q8TEV8	140 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CT55	Q8WUE5	264 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	FGF13	Q92913	245 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	DNAJC30	Q96LL9	226 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR52B2	Q96RD2	323 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	GINS4	Q9BRT9	223 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	HHLA3	Q9XRX5	114 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	FUT9	Q9Y231	359 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	FAM215A	Q9Y5M1	114 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR51B4	Q9Y5P0	310 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	ARL5A	Q9Y689	179 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	MINOS1-NBL1	R4GNA1	71 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM56-RWDD3	S4R434	201 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	CRB1	P82279	1406 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SDK1	Q7Z5N4	2213 aa		0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	SETD1A	O15047	1707 aa	Known RBP	0.69	□□□□□ -2.3
CCNL1-223	ENST00000481173	TRAV9-1	A0A075B6T8	112 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	FUOM	A2VDF0	154 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR4C46	A6NHA9	309 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	C11orf86	A6NJI1	115 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173		F8W036	122 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173		J3QQQ9	107 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	LST1	O00453	97 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	PLA2G10	O15496	165 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SULT1B1	O43704	296 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	CHP2	O43745	196 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	PDE6D	O43924	150 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TCRB	P04435	133 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	PRM2	P04554	102 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SERPINE1	P05121	402 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	BPGM	P07738	259 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	MSMB	P08118	114 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	METTL15P1	P0C7V9	234 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF728	P0DKX0	622 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	CCL3	P10147	92 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	PPIB	P23284	216 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BO	P23527	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HSD11B1	P28845	292 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	CASP1	P29466	404 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BB	P33778	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	BRCA1	P38398	1863 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	GABRA4	P48169	554 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	REG1B	P48304	166 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	EIF2B2	P49770	351 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	FXYD2	P54710	66 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BD	P58876	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TPI1	P60174	286 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	YPEL3	P61236	119 aa	Predicted RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPL26	P61254	145 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SNRPD2	P62316	118 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BC	P62807	126 aa		0.68	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms