RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MARC2Q969Z3 335 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 ZNF2Q9BSG1 426 aaPredicted RBP8.74□□□□□ -1.01
CCM2-213ENST00000480658 GAR1Q9NY12 217 aaKnown RBP8.74□□□□□ -1.01
CCM2-213ENST00000480658 COL7A1Q02388 2944 aa8.74□□□□□ -1.01
CCM2-213ENST00000480658 A8MWP6 167 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 BMPR1BO00238 502 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 SNAPC5O75971 98 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 OR2J3O76001 311 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 ATG12O94817 140 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 CSN3P07498 182 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 TBPP20226 339 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 RCVRNP35243 200 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 ARL3P36405 182 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 ZNF45Q02386 682 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 ANKRD55Q3KP44 614 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 SLC38A6Q8IZM9 456 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 OR5B3Q8NH48 314 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 OR51H1Q8NH63 302 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 LSM10Q969L4 123 aaKnown RBP8.73□□□□□ -1.01
CCM2-213ENST00000480658 TMEM56Q96MV1 263 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 SPATA25Q9BR10 227 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
CCM2-213ENST00000480658 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 TRIM64CA6NLI5 447 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 UPK2O00526 184 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 RLN1P04808 185 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 IFNA6P05013 189 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 IL6RP08887 468 aaPredicted RBP8.72□□□□□ -1.01
CCM2-213ENST00000480658 MYOD1P15172 320 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 RPA2P15927 270 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 GNRHRP30968 328 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 ELLP55199 621 aaPredicted RBP8.72□□□□□ -1.01
CCM2-213ENST00000480658 OR2B8PP59922 312 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 C10orf55Q5SWW7 151 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 SBSPONQ8IVN8 264 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 GDPD1Q8N9F7 314 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 OR1L8Q8NGR8 309 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 VN1R17PQ8TDU5 208 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 ISOC1Q96CN7 298 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 DGCR14Q96DF8 476 aaKnown RBP8.72□□□□□ -1.01
CCM2-213ENST00000480658 ZNF486Q96H40 463 aaPredicted RBP8.72□□□□□ -1.01
CCM2-213ENST00000480658 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 FUNDC2Q9BWH2 189 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 COMMD3Q9UBI1 195 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
CCM2-213ENST00000480658 RABL2BQ9UNT1 228 aa8.72□□□□□ -1.01
CCM2-213ENST00000480658 HMX3A6NHT5 357 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 PRH1P02810 166 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 TRAPPC2P0DI81 140 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 TRAPPC2BP0DI82 140 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.029e-9■■■■■ 35.7
CCM2-213ENST00000480658 HRH1P35367 487 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 RFX2P48378 723 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 UCP3P55916 312 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 LSM3P62310 102 aaKnown RBP8.71□□□□□ -1.02
CCM2-213ENST00000480658 MRPS10P82664 201 aaKnown RBP8.71□□□□□ -1.02
CCM2-213ENST00000480658 SPSB3Q6PJ21 355 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 IL34Q6ZMJ4 242 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 ARRDC1Q8N5I2 433 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 GPX8Q8TED1 209 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 ASCL2Q99929 193 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 ZC4H2Q9NQZ6 224 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 C19orf73Q9NVV2 129 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 UFC1Q9Y3C8 167 aa8.71□□□□□ -1.02
CCM2-213ENST00000480658 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 MEIS3P1A6NDR6 274 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 C2orf70A6NJV1 201 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 PGLYRP1O75594 196 aaPredicted RBP8.7□□□□□ -1.02
CCM2-213ENST00000480658 S1PR2O95136 353 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 PMP2P02689 132 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 AREGP15514 252 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 PLET1Q6UQ28 207 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 Q8N1Y9 231 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 IL17DQ8TAD2 202 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 BSCL2Q96G97 398 aaPredicted RBP8.7□□□□□ -1.02
CCM2-213ENST00000480658 FANCD2OSQ96PS1 177 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
CCM2-213ENST00000480658 IGLC7A0M8Q6 106 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 SCGB2A1O75556 95 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 GABARAPO95166 117 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 SERPINE2P07093 398 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 FOLR2P14207 255 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 ZNF182P17025 639 aaPredicted RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 HLA-DMAP28067 261 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 MECP2P51608 486 aaKnown RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 CD81P60033 236 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 NCS1P62166 190 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 DEFA5Q01523 94 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 SSBP1Q04837 148 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms