RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 AP3S1Q92572 193 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 S1PR2O95136 353 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 CSN3P07498 182 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 AREGP15514 252 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 RPEL1Q2QD12 228 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 CMTM1Q8IZ96 169 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 MRPS26Q9BYN8 205 aaKnown RBP17.85■□□□□ 0.45
C9orf3-215ENST00000478473 TENM3Q9P273 2699 aa17.85■□□□□ 0.45
C9orf3-215ENST00000478473 TRAV3A0A0B4J244 114 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 IGLC7A0M8Q6 106 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 GPR31O00270 319 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 OR2J3O76001 311 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 DHFRP00374 187 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 HIST1H1BP16401 226 aaKnown RBP17.84■□□□□ 0.45
C9orf3-215ENST00000478473 HLA-DMAP28067 261 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 UCP3P55916 312 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 ZNF585BQ52M93 769 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 GPR107Q5VW38 600 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 THOC7Q6I9Y2 204 aaKnown RBP17.84■□□□□ 0.45
C9orf3-215ENST00000478473 LPCAT3Q6P1A2 487 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 Q8N1Y9 231 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 DGCR14Q96DF8 476 aaKnown RBP17.84■□□□□ 0.45
C9orf3-215ENST00000478473 HRASLSQ9HDD0 168 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 TMEM140Q9NV12 185 aa17.84■□□□□ 0.45
C9orf3-215ENST00000478473 IGLV11-55A0A075B6I3 123 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 DPPA5A6NC42 116 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 A8MZ25 164 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 RLN1P04808 185 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 MYOD1P15172 320 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 SNX29P2Q8IUI4 249 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 WWC2-AS2Q96NR7 200 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 FBXL7Q9UJT9 491 aa17.83■□□□□ 0.44
C9orf3-215ENST00000478473 STAB2Q8WWQ8 2551 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 MARCH11A6NNE9 402 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 FCAMRQ8WWV6 532 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 THAP7Q9BT49 309 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-215ENST00000478473 RSRP1Q9BUV0 290 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 COMMD5Q9GZQ3 224 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 PEMTQ9UBM1 199 aa17.82■□□□□ 0.44
C9orf3-215ENST00000478473 H0Y980 276 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 NDUFB8O95169 186 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 C19orf35Q6ZS72 473 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 HSD17B13Q7Z5P4 300 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-215ENST00000478473 DMBX1Q8NFW5 382 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 OR2K2Q8NGT1 345 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 CCDC140Q96MF4 163 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 U3KQK5 164 aa17.81■□□□□ 0.44
C9orf3-215ENST00000478473 LGALS9O00182 355 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 GGCTO75223 188 aaKnown RBP17.8■□□□□ 0.44
C9orf3-215ENST00000478473 PTBP1P26599 531 aaKnown RBP eCLIP17.8■□□□□ 0.441e-7■■■□□ 14.7
C9orf3-215ENST00000478473 LPAR6P43657 344 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 TSPAN5P62079 268 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 HAPLN4Q86UW8 402 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 GPHB5Q86YW7 130 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 C15orf40Q8WUR7 153 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 QTRT1Q9BXR0 403 aaKnown RBP17.8■□□□□ 0.44
C9orf3-215ENST00000478473 MTFP1Q9UDX5 166 aa17.8■□□□□ 0.44
C9orf3-215ENST00000478473 ERVK-16P61578 105 aa17.79■□□□□ 0.44
C9orf3-215ENST00000478473 ADAMTSL5Q6ZMM2 481 aa17.79■□□□□ 0.44
C9orf3-215ENST00000478473 GPR141Q7Z602 305 aa17.79■□□□□ 0.44
C9orf3-215ENST00000478473 LHFPL1Q86WI0 220 aa17.79■□□□□ 0.44
C9orf3-215ENST00000478473 Q8N402 240 aa17.79■□□□□ 0.44
C9orf3-215ENST00000478473 TBPP20226 339 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 SLC38A6Q8IZM9 456 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 ARRDC1Q8N5I2 433 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 OR1L8Q8NGR8 309 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 CXorf58Q96LI9 332 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 ABHD1Q96SE0 405 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 BCL7BQ9BQE9 202 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 NDUFA4L2Q9NRX3 87 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 C19orf73Q9NVV2 129 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 EXTL2Q9UBQ6 330 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 KLK11Q9UBX7 282 aa17.78■□□□□ 0.44
C9orf3-215ENST00000478473 TRBV7-1A0A0A6YYK4 115 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 TEX50A0A1B0GTY4 177 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 FAM25AB3EWG3 89 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 FAM25CB3EWG5 89 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 FAM25GB3EWG6 89 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 FRMD6-AS1P0C7T7 363 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 TRAPPC2P0DI81 140 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 TRAPPC2BP0DI82 140 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 S100GP29377 79 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 LCN12Q6JVE5 192 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 SBSPONQ8IVN8 264 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 OR52I2Q8NH67 350 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 EEF1AKMT3Q96AZ1 226 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 MIXL1Q9H2W2 232 aa17.77■□□□□ 0.44
C9orf3-215ENST00000478473 HUWE1Q7Z6Z7 4374 aaKnown RBP17.77■□□□□ 0.43
C9orf3-215ENST00000478473 PPP5D1E7EU14 171 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 KRASP01116 189 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 DEFA4P12838 97 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 RND3P61587 244 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 GDPD1Q8N9F7 314 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 ZNF486Q96H40 463 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-215ENST00000478473 ASCL2Q99929 193 aa17.76■□□□□ 0.43
C9orf3-215ENST00000478473 REG1AP05451 166 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 SERPINE2P07093 398 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 WT1-ASQ06250 92 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 SPCS2Q15005 226 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 PHLDA2Q53GA4 152 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms