RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	FBXL7	Q9UJT9	491 aa		10.54	□□□□□ -0.72
HDAC7-222	ENST00000477937		H0Y980	276 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	BMPR1B	O00238	502 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	GPR31	O00270	319 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	S1PR2	O95136	353 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	CSN3	P07498	182 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	FGF2	P09038	288 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	MYOD1	P15172	320 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	HIST1H1B	P16401	226 aa	Known RBP	10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	ZNF182	P17025	639 aa	Predicted RBP	10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	CTRB1	P17538	263 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	F2R	P25116	425 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	RCVRN	P35243	200 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	ERVK-16	P61578	105 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	CTF1	Q16619	201 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	CTRB2	Q6GPI1	263 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	IL34	Q6ZMJ4	242 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	DGCR14	Q96DF8	476 aa	Known RBP	10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	WWC2-AS2	Q96NR7	200 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	FANCD2OS	Q96PS1	177 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	MRPS26	Q9BYN8	205 aa	Known RBP	10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	TMEM140	Q9NV12	185 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	SIGLEC8	Q9NYZ4	499 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937		U3KQK5	164 aa		10.53	□□□□□ -0.72
HDAC7-222	ENST00000477937	TRAV3	A0A0B4J244	114 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	CGB1	A6NKQ9	187 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	NDUFB8	O95169	186 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	REG1A	P05451	166 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	S100G	P29377	79 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	LPAR6	P43657	344 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	OR2B8P	P59922	312 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	C19orf35	Q6ZS72	473 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	SRSF8	Q9BRL6	282 aa	Known RBP	10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	FXYD6	Q9H0Q3	95 aa		10.52	□□□□□ -0.73
HDAC7-222	ENST00000477937	MARCH11	A6NNE9	402 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	GGCT	O75223	188 aa	Known RBP	10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	RPA2	P15927	270 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	KLK9	Q2XQG4	91 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	GPR141	Q7Z602	305 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	FCAMR	Q8WWV6	532 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	EEF1AKMT3	Q96AZ1	226 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	QTRT1	Q9BXR0	403 aa	Known RBP	10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	KLK9	Q9UKQ9	250 aa		10.51	□□□□□ -0.73
HDAC7-222	ENST00000477937	IGLV11-55	A0A075B6I3	123 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	IGLC7	A0M8Q6	106 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	PPP5D1	E7EU14	171 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	SNAPC5	O75971	98 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	KRAS	P01116	189 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	FRMD6-AS1	P0C7T7	363 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	TRAPPC2	P0DI81	140 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	TRAPPC2B	P0DI82	140 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	ARL3	P36405	182 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	UCP3	P55916	312 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	ZNF585B	Q52M93	769 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	PHLDA2	Q53GA4	152 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	THOC7	Q6I9Y2	204 aa	Known RBP	10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	LCN12	Q6JVE5	192 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	SBSPON	Q8IVN8	264 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	CADM3	Q8N126	398 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937		Q8N1Y9	231 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937		Q8N402	240 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	OR1L8	Q8NGR8	309 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	C15orf40	Q8WUR7	153 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	CXorf58	Q96LI9	332 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	THYN1	Q9P016	225 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	EXTL2	Q9UBQ6	330 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	DMRT1	Q9Y5R6	373 aa		10.5	□□□□□ -0.73
HDAC7-222	ENST00000477937	TRBV7-1	A0A0A6YYK4	115 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	TEX50	A0A1B0GTY4	177 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	CYB5B	O43169	146 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	TPPP	O94811	219 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	OR2C1	O95371	312 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	IGHV3-23	P01764	117 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	HLA-A	P01891	365 aa	Known RBP	10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	IFNA6	P05013	189 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	G6PC	P35575	357 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	ALDH3B2	P48448	385 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	CLEC19A	Q6UXS0	136 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	GPHB5	Q86YW7	130 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	SGPP2	Q8IWX5	399 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	SLC38A6	Q8IZM9	456 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	OR10W1	Q8NGF6	305 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	OR2K2	Q8NGT1	345 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	CCDC140	Q96MF4	163 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937	KLK11	Q9UBX7	282 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937		S4R3C0	116 aa		10.49	□□□□□ -0.73
HDAC7-222	ENST00000477937		M0QYG6	137 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	LGALS9	O00182	355 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	RGS5	O15539	181 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	SERPINE2	P07093	398 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	IGHV4-30-4	P0DP06	118 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	MECP2	P51608	486 aa	Known RBP	10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	FAM106A	Q4KMX7	169 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	RNASE12	Q5GAN4	147 aa	Known RBP	10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	RNASE10	Q5GAN6	216 aa	Known RBP	10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	TBC1D26	Q86UD7	250 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	GTSCR1	Q86UQ5	136 aa		10.48	□□□□□ -0.73
HDAC7-222	ENST00000477937	TSC22D3	Q99576	134 aa		10.48	□□□□□ -0.73

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