RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 ENY2Q9NPA8 101 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 C1orf196B1AJZ1 125 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 PRSS46E5RG02 174 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 IFNA4P05014 189 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 MYOD1P15172 320 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 RAB5AP20339 215 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 APOBEC3AP31941 199 aaPredicted RBP9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 RAB5BP61020 215 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 PMS2P11Q13670 270 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 POU2AF1Q16633 256 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 HEPN1Q6WQI6 88 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF833PQ6ZTB9 187 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 Q8N7P7 452 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 GGACTQ9BVM4 153 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 HINT2Q9BX68 163 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 MS4A5Q9H3V2 200 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR51B2Q9Y5P1 312 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 UPK2O00526 184 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 DVL1O14640 695 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 CYB5BO43169 146 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 PLAUP00749 431 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 DEFA4P12838 97 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 CA7P43166 264 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
HLA-DMB-260ENST00000477537 A0A087WWC5 75 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 IGHV1-69-2A0A0G2JMI3 117 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 SRRM4A7MD48 611 aaKnown RBP9□□□□□ -0.97
HLA-DMB-260ENST00000477537 B9A039 149 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 CCL21O00585 134 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 MPDU1O75352 247 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 CA2P00918 260 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 NPY1RP25929 384 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 CDC34P49427 236 aaPredicted RBP9□□□□□ -0.97
HLA-DMB-260ENST00000477537 PSMB3P49720 205 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 EFNB3Q15768 340 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 GCSAMLQ5JQS6 135 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 TREML4Q6UXN2 200 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 SLC24A4Q8NFF2 622 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 GATAD1Q8WUU5 269 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 YPEL4Q96NS1 127 aa9□□□□□ -0.97
HLA-DMB-260ENST00000477537 APOA2P02652 100 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 OPN1MWP04001 364 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 IL6RP08887 468 aaPredicted RBP8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 OPN1MW2P0DN77 364 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 OPN1MW3P0DN78 364 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 LOXP28300 417 aaPredicted RBP8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 CD81P60033 236 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 MEF2BQ02080 365 aaPredicted RBP8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 KLRB1Q12918 225 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 MGST2Q99735 147 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 MANBALQ9NQG1 85 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 J3QR06 171 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 CHRNB4P30926 498 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 MAS1LP35410 378 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 OPRK1P41145 380 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 REG1BP48304 166 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR10X1Q8NGY0 326 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 GGTLC1Q9BX51 225 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 PLEKHA3Q9HB20 300 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 KAAG1Q9UBP8 84 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
HLA-DMB-260ENST00000477537 TNCP24821 2201 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 B4DEV8 164 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 SEC14L6B5MCN3 397 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 H0YJW9 148 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 NDUFA2O43678 99 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 SOX15O60248 233 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 KBTBD11O94819 623 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 YIF1AO95070 293 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 SAA1P0DJI8 122 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 AGAP20933 346 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 DLX6P56179 175 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF674Q2M3X9 581 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 ARSJQ5FYB0 599 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 MIC13Q5XKP0 118 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 WDR25Q64LD2 544 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 ST6GALNAC3Q8NDV1 305 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR4F5Q8NH21 305 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 BBC3Q96PG8 261 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR4F4Q96R69 305 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 PATZ1Q9HBE1 687 aaKnown RBP8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 SIRT7Q9NRC8 400 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 BET1LQ9NYM9 111 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 PRELID1Q9Y255 219 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF257Q9Y2Q1 563 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 PXMP4Q9Y6I8 212 aa8.98□□□□□ -0.97
HLA-DMB-260ENST00000477537 TEX50A0A1B0GTY4 177 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 A0A1W2PPV4 95 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 SIAH2O43255 324 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 PAGE4O60829 102 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms