RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 MED9Q9NWA0 146 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 NAV3Q8IVL0 2385 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 IGHV1-3A0A0C4DH29 117 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 TEX50A0A1B0GTY4 177 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 PMS2P5A8MQ11 134 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 SCO1O75880 301 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 OR8U8P0C7N1 319 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 APELAP0DMC3 54 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 VDAC2P45880 294 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 TUSC1Q2TAM9 212 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 AKR1C8PQ5T2L2 129 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 HSD17B13Q7Z5P4 300 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 COMMD5Q9GZQ3 224 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 VSIRQ9H7M9 311 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 FBN2P35556 2912 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 TSPAN15O95858 294 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 HTR1DP28221 377 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 MC5RP33032 325 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 ZNF137PP52743 207 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 ELLP55199 621 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 LMO4P61968 165 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 RPL8P62917 257 aaKnown RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 SSX2Q16385 188 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 POU2AF1Q16633 256 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 LRRC75BQ2VPJ9 315 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 VMO1Q7Z5L0 202 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 PDPNQ86YL7 162 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 BPIFCQ8NFQ6 507 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 OR52E5Q8NH55 327 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 GNPNAT1Q96EK6 184 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 WDR61Q9GZS3 305 aaKnown RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 TREM1Q9NP99 234 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 UQCC1Q9NVA1 299 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 PRNDQ9UKY0 176 aa5.36□□□□□ -1.55
CCDC30-209ENST00000477155 FOXA2Q9Y261 457 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 KLF2Q9Y5W3 355 aaPredicted RBP5.36□□□□□ -1.55
CCDC30-209ENST00000477155 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 A8MXK9 166 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PRTN3P24158 256 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PDLIM4P50479 330 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 RAB13P51153 203 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 BEND2Q8NDZ0 799 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 TMEM170AQ8WVE7 144 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 FAM168AQ92567 244 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 TAF15Q92804 592 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 TNFRSF14Q92956 283 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PINX1Q96BK5 328 aaKnown RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 AIFM2Q9BRQ8 373 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PLEKHA3Q9HB20 300 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 BET1LQ9NYM9 111 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 TIMM23O14925 209 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 CA2P00918 260 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 COX6B1P14854 86 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 FGF7P21781 194 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 AARDQ4LEZ3 155 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 BTNL8Q6UX41 500 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 SFT2D1Q8WV19 159 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 ZNF430Q9H8G1 570 aaPredicted RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PARP11Q9NR21 331 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 DPM3Q9P2X0 92 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 CSPG4Q6UVK1 2322 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 M0R1W7 72 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 IGLV2-23P01705 113 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 APOC3P02656 99 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 RBP4P02753 201 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 SNCAP37840 140 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 F2RL1P55085 397 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 GNB1P62873 340 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 RPP30P78346 268 aaKnown RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 CCL20P78556 96 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 MLANAQ16655 118 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 HCP5Q6MZN7 132 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 FAM71F2Q6NXP2 309 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 PUSL1Q8N0Z8 303 aaKnown RBP5.35□□□□□ -1.55
CCDC30-209ENST00000477155 SLC24A4Q8NFF2 622 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 TMEM147Q9BVK8 224 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 RPRMQ9NS64 109 aa5.35□□□□□ -1.55
CCDC30-209ENST00000477155 IGHV4-61A0A0C4DH41 118 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 FAM157AC9JC47 383 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 RNASEK-C17orf49H0YIS7 233 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 HMGB3O15347 200 aaKnown RBP5.34□□□□□ -1.55
CCDC30-209ENST00000477155 REG1AP05451 166 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 NPY1RP25929 384 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 CD1BP29016 333 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 LGALS4P56470 323 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 RAB11AP62491 216 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 HES1Q14469 280 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 VMA21Q3ZAQ7 101 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 AMMECR1Q9Y4X0 333 aaPredicted RBP5.34□□□□□ -1.55
CCDC30-209ENST00000477155 NAV2Q8IVL1 2488 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 UMAD1C9J7I0 102 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 ACTL6BO94805 426 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 TOX4O94842 621 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.55
CCDC30-209ENST00000477155 DEFA4P12838 97 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms