RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RBFOX2O43251 390 aaKnown RBP eCLIP9.77□□□□□ -0.85
MRPL55-228ENST00000476267 DHFRP00374 187 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 FGF2P09038 288 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 PTHLHP12272 177 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 GNG2P59768 71 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 GABARAPL2P60520 117 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 EWSR1Q01844 656 aaKnown RBP eCLIP9.77□□□□□ -0.85
MRPL55-228ENST00000476267 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 TM4SF20Q53R12 229 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 SFXN4Q6P4A7 337 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 BTNL8Q6UX41 500 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 SSX9Q7RTT3 188 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 TPRA1Q86W33 373 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 OR52B4Q8NGK2 314 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 SLC25A38Q96DW6 304 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF436Q9C0F3 470 aaPredicted RBP9.77□□□□□ -0.85
MRPL55-228ENST00000476267 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 DAPK2Q9UIK4 370 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 DNAH10Q8IVF4 4471 aa9.77□□□□□ -0.85
MRPL55-228ENST00000476267 LOC102724200A0A096LPH7 203 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-228ENST00000476267 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 TRAV25A0A0B4J276 109 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 TNFSF12O43508 249 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 MRPS14O60783 128 aaKnown RBP9.76□□□□□ -0.85
MRPL55-228ENST00000476267 SCAF4O95104 1147 aaKnown RBP9.76□□□□□ -0.85
MRPL55-228ENST00000476267 CLEC3BP05452 202 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 HSPA13P48723 471 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 ELLP55199 621 aaPredicted RBP9.76□□□□□ -0.85
MRPL55-228ENST00000476267 TAS2R31P59538 309 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 SPAG16Q8N0X2 631 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 GVQW1Q8N7I0 195 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 BEST4Q8NFU0 473 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 OR13F1Q8NGS4 319 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 MARC2Q969Z3 335 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 CXorf58Q96LI9 332 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 RHBDL2Q9NX52 303 aa9.76□□□□□ -0.85
MRPL55-228ENST00000476267 UPK2O00526 184 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 PPYP01298 95 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 FCGR2CP31995 323 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 GPR183P32249 361 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 SCAND1P57086 179 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 HOGA1Q86XE5 327 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 SPARTQ8N0X7 666 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 ZBTB34Q8NCN2 500 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 OR5H6Q8NGV6 325 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 SECTM1Q8WVN6 248 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF414Q96IQ9 312 aa9.75□□□□□ -0.85
MRPL55-228ENST00000476267 SRSF8Q9BRL6 282 aaKnown RBP9.75□□□□□ -0.85
MRPL55-228ENST00000476267 MRPL27Q9P0M9 148 aaKnown RBP9.75□□□□□ -0.85
MRPL55-228ENST00000476267 RRP15Q9Y3B9 282 aaKnown RBP9.75□□□□□ -0.85
MRPL55-228ENST00000476267 SULT1C2O00338 296 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 HPRT1P00492 218 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 DEFA4P12838 97 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 PTBP1P26599 531 aaKnown RBP eCLIP9.74□□□□□ -0.85
MRPL55-228ENST00000476267 TNFRSF9Q07011 255 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF818PQ6ZRF7 136 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 TMEM190Q8WZ59 177 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-228ENST00000476267 VCX3BQ9H321 246 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 C5orf66Q9H5L9 145 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 RAB26Q9ULW5 256 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
MRPL55-228ENST00000476267 HERC2O95714 4834 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 F8W735 103 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-228ENST00000476267 TSPAN4O14817 238 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 TGOLN2O43493 480 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 CLEC2LP0C7M8 214 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 NQO2P16083 231 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 SDC2P34741 201 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 ARPC4P59998 168 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 WT1-ASQ06250 92 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 ZNF585BQ52M93 769 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 Q6ZWC4 215 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 OR2C3Q8N628 320 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 OR10W1Q8NGF6 305 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 VN1R17PQ8TDU5 208 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 AIFM2Q9BRQ8 373 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 RNF167Q9H6Y7 350 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 PLEKHA2Q9HB19 425 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 HRASLSQ9HDD0 168 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 TMEM140Q9NV12 185 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 UFC1Q9Y3C8 167 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 ETV7Q9Y603 341 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
MRPL55-228ENST00000476267 TRAV18A0A075B6X5 111 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 A0A0A6YYH2 397 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 A6NJ64 397 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 S1PR2O95136 353 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 SERPINE2P07093 398 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 ATF4P18848 351 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-228ENST00000476267 PSMB9P28065 219 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 MFAP2P55001 183 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms