RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 MARC2Q969Z3 335 aa18.58■□□□□ 0.56
TMEM54-205ENST00000475208 RAB26Q9ULW5 256 aa18.58■□□□□ 0.56
TMEM54-205ENST00000475208 TRAV25A0A0B4J276 109 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 GALP22466 123 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 GPR183P32249 361 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 TIMM50Q3ZCQ8 353 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 RBPMS2Q6ZRY4 209 aaKnown RBP18.57■□□□□ 0.56
TMEM54-205ENST00000475208 OR1L6Q8NGR2 347 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 BET1LQ9NYM9 111 aa18.57■□□□□ 0.56
TMEM54-205ENST00000475208 NOTOA8MTQ0 251 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 TNFSF12O43508 249 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 ATP6V1G2O95670 118 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 C8orf88P0DMB2 117 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 ZNF585BQ52M93 769 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 OR4A5Q8NH83 315 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 HRASLSQ9HDD0 168 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 BLOC1S6Q9UL45 172 aa18.56■□□□□ 0.56
TMEM54-205ENST00000475208 IGHV3-35A0A0C4DH35 117 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 A0A0J9YWU9 116 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 SCGNO76038 276 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 OR2B8PP59922 312 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 ZNF502Q8TBZ5 544 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 SECTM1Q8WVN6 248 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 CCL28Q9NRJ3 127 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 MRPL27Q9P0M9 148 aaKnown RBP18.55■□□□□ 0.56
TMEM54-205ENST00000475208 UFC1Q9Y3C8 167 aa18.55■□□□□ 0.56
TMEM54-205ENST00000475208 NUPR2A6NF83 97 aa18.54■□□□□ 0.56
TMEM54-205ENST00000475208 EWSR1Q01844 656 aaKnown RBP eCLIP18.54■□□□□ 0.56
TMEM54-205ENST00000475208 SPAG16Q8N0X2 631 aa18.54■□□□□ 0.56
TMEM54-205ENST00000475208 AIFM2Q9BRQ8 373 aa18.54■□□□□ 0.56
TMEM54-205ENST00000475208 DAPK2Q9UIK4 370 aa18.54■□□□□ 0.56
TMEM54-205ENST00000475208 IGLC7A0M8Q6 106 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 ELLP55199 621 aaPredicted RBP18.53■□□□□ 0.56
TMEM54-205ENST00000475208 ARPC4P59998 168 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 PLET1Q6UQ28 207 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 LYG2Q86SG7 212 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 WFDC3Q8IUB2 231 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 OR2C3Q8N628 320 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 OR13F1Q8NGS4 319 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 LGALS14Q8TCE9 139 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 TP53TG1Q9Y2A0 90 aa18.53■□□□□ 0.56
TMEM54-205ENST00000475208 PTHLHP12272 177 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 FCGR2CP31995 323 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 APOC4P55056 127 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 TNFRSF9Q07011 255 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 MSMO1Q15800 293 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 Q6ZWC4 215 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 SLC38A6Q8IZM9 456 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 SPAG8Q99932 426 aaPredicted RBP18.52■□□□□ 0.56
TMEM54-205ENST00000475208 ZNF436Q9C0F3 470 aaPredicted RBP18.52■□□□□ 0.56
TMEM54-205ENST00000475208 TXNL4BQ9NX01 149 aaKnown RBP18.52■□□□□ 0.56
TMEM54-205ENST00000475208 UBQLN2Q9UHD9 624 aa18.52■□□□□ 0.56
TMEM54-205ENST00000475208 TRAV3A0A0B4J244 114 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 SULT1C2O00338 296 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 RBFOX2O43251 390 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM54-205ENST00000475208 SPRY2O43597 315 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 PTBP1P26599 531 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM54-205ENST00000475208 BMI1P35226 326 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 TAS2R31P59538 309 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 DEFB135Q30KP9 77 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 BEST4Q8NFU0 473 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 C5orf66Q9H5L9 145 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 RHBDL2Q9NX52 303 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 THYN1Q9P016 225 aa18.51■□□□□ 0.55
TMEM54-205ENST00000475208 UPK2O00526 184 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 PPYP01298 95 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 FGF9P31371 208 aaPredicted RBP18.5■□□□□ 0.55
TMEM54-205ENST00000475208 GABARAPL2P60520 117 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 CEMP1Q6PRD7 247 aaPredicted RBP18.5■□□□□ 0.55
TMEM54-205ENST00000475208 GVQW1Q8N7I0 195 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 ZBTB34Q8NCN2 500 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 TMEM190Q8WZ59 177 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 SRSF8Q9BRL6 282 aaKnown RBP18.5■□□□□ 0.55
TMEM54-205ENST00000475208 COMMD5Q9GZQ3 224 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 RRP15Q9Y3B9 282 aaKnown RBP18.5■□□□□ 0.55
TMEM54-205ENST00000475208 FRAS1Q86XX4 4008 aa18.5■□□□□ 0.55
TMEM54-205ENST00000475208 TGOLN2O43493 480 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 MRPS14O60783 128 aaKnown RBP18.49■□□□□ 0.55
TMEM54-205ENST00000475208 NQO2P16083 231 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 CATR1Q13166 79 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 POU2AF1Q16633 256 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 SFXN4Q6P4A7 337 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 TPRA1Q86W33 373 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 SLC5A7Q9GZV3 580 aa18.49■□□□□ 0.55
TMEM54-205ENST00000475208 TSPAN4O14817 238 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 HPRT1P00492 218 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 FXYD4P59646 89 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 ZNF773Q6PK81 442 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 OR10W1Q8NGF6 305 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 VN1R17PQ8TDU5 208 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 QTRT1Q9BXR0 403 aaKnown RBP18.48■□□□□ 0.55
TMEM54-205ENST00000475208 TMEM140Q9NV12 185 aa18.48■□□□□ 0.55
TMEM54-205ENST00000475208 OR2T8A6NH00 312 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 UBE2CO00762 179 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 RPA2P15927 270 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 PSMB9P28065 219 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 UBE2UQ5VVX9 321 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 HOGA1Q86XE5 327 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 GDPD1Q8N9F7 314 aa18.47■□□□□ 0.55
TMEM54-205ENST00000475208 DMBX1Q8NFW5 382 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms