RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SLC25A24Q6NUK1 477 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 OR10P1Q8NGE3 313 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 RNF141Q8WVD5 230 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 ASH1LQ9NR48 2969 aaKnown RBP11.79□□□□□ -0.52
HIF3A-206ENST00000472815 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 TIMM23O14925 209 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 ACTL6BO94805 426 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 IFNA10P01566 189 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 KRTAP10-9P60411 292 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 MBD6Q96DN6 1003 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
HIF3A-206ENST00000472815 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 A0A1W2PN81 502 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 SLC25A17O43808 307 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 OR8U8P0C7N1 319 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 MAS1LP35410 378 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 CHRNA7P36544 502 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 HABP2Q14520 560 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-206ENST00000472815 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-206ENST00000472815 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 ARV1Q9H2C2 271 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
HIF3A-206ENST00000472815 VENTXO95231 258 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 MOSP00540 346 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 IGLV2-23P01705 113 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 SSX2Q16385 188 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 SPINK9Q5DT21 86 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 SCGB1C1Q8TD33 95 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 TMED6Q8WW62 240 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.52
HIF3A-206ENST00000472815 HINT2Q9BX68 163 aa11.77□□□□□ -0.52
HIF3A-206ENST00000472815 TET2Q6N021 2002 aaPredicted RBP11.77□□□□□ -0.52
HIF3A-206ENST00000472815 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 BRS3P32247 399 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-206ENST00000472815 ERHP84090 104 aaKnown RBP11.77□□□□□ -0.53
HIF3A-206ENST00000472815 PRSS57Q6UWY2 283 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
HIF3A-206ENST00000472815 TEX50A0A1B0GTY4 177 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 NPFFO15130 113 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 RAB5CP51148 216 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 HES1Q14469 280 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 PLGLAQ15195 96 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 PSG5Q15238 335 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 SLC24A4Q8NFF2 622 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 OR4C12Q96R67 309 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 GGACTQ9BVM4 153 aa11.76□□□□□ -0.53
HIF3A-206ENST00000472815 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-206ENST00000472815 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-206ENST00000472815 CSMD2Q7Z408 3487 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 LINC00862A6NCI5 91 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 INS-IGF2F8WCM5 200 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 FBXO24O75426 580 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 NMBP08949 121 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 SPP1P10451 314 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 NPY1RP25929 384 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 SAA4P35542 130 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 SNCAP37840 140 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 LOXL1Q08397 574 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-206ENST00000472815 PPP1R27Q86WC6 154 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 CFHR4Q92496 578 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
HIF3A-206ENST00000472815 PFDN2Q9UHV9 154 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 SIGLEC9Q9Y336 463 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 POLQO75417 2590 aa11.75□□□□□ -0.53
HIF3A-206ENST00000472815 NBR2O15453 112 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 IFNA4P05014 189 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
HIF3A-206ENST00000472815 MMDQ15546 238 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 PRSS8Q16651 343 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 Q5PR19 223 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 ETV3LQ6ZN32 361 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms