RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SSSCA1O60232 199 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 SOX15O60248 233 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 SCGB1D2O95969 90 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 ARG1P05089 322 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 MAS1LP35410 378 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 SULT1A1P50225 295 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 BPIFB3P59826 476 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 POLR2GP62487 172 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTPRE-207ENST00000471218 PAX8Q06710 450 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 VMA21Q3ZAQ7 101 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 TPTE2P1Q5T6R2 138 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 Q6ZRM9 215 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 BAP18Q8IXM2 172 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 TEX45Q8NA69 505 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 OR8H1Q8NGG4 311 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM167AQ8TBQ9 72 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 SCARB1Q8WTV0 552 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 HARBI1Q96MB7 349 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
PTPRE-207ENST00000471218 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 MS4A7Q9GZW8 240 aaPredicted RBP7.39□□□□□ -1.23
PTPRE-207ENST00000471218 ARV1Q9H2C2 271 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 ZC4H2Q9NQZ6 224 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 BOLA1Q9Y3E2 137 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 INSIG2Q9Y5U4 225 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 IGHV1-3A0A0C4DH29 117 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 J3QLI3 93 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 UPK2O00526 184 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 SHOXO15266 292 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 KBTBD11O94819 623 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 MSMBP08118 114 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 ZFP36P26651 326 aaKnown RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 RAB5CP51148 216 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 CAV2P51636 162 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 RAB14P61106 215 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 HSPE1P61604 102 aaKnown RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 ARF6P62330 175 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 RELBQ01201 579 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 EWSR1Q01844 656 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 CLLU1Q5K131 121 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 OR4A47Q6IF82 309 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM14EPQ6UXP3 125 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 HSD17B13Q7Z5P4 300 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM252Q8N6L7 170 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 DTD1Q8TEA8 209 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 ST8SIA2Q92186 375 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 PINX1Q96BK5 328 aaKnown RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 ZNF471Q9BX82 626 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-207ENST00000471218 SLC25A32Q9H2D1 315 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 MED9Q9NWA0 146 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
PTPRE-207ENST00000471218 A0A1W2PN81 502 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 A0A1W2PPE3 182 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 A0A1W2PPI3 338 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 MSGN1A6NI15 193 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 FNDC10F2Z333 226 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 H7C2Y5 167 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 WIPF1O43516 503 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 RBMXL2O75526 392 aaKnown RBP7.37□□□□□ -1.23
PTPRE-207ENST00000471218 TOX4O94842 621 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 IGHV3-7P01780 117 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 IGKV1-16P04430 117 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 OR8U8P0C7N1 319 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 CHRNA7P36544 502 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 DYNLT3P51808 116 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 PAX9P55771 341 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 LGALS4P56470 323 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 HILS1P60008 231 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 SRSF2Q01130 221 aaKnown RBP7.37□□□□□ -1.23
PTPRE-207ENST00000471218 FOXL1Q12952 345 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 UTF1Q5T230 341 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 HCP5Q6MZN7 132 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 VMO1Q7Z5L0 202 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 THNSL2Q86YJ6 484 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 MMD2Q8IY49 270 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 PNKDQ8N490 385 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 MALSU1Q96EH3 234 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 GNPNAT1Q96EK6 184 aaPredicted RBP7.37□□□□□ -1.23
PTPRE-207ENST00000471218 HIPK2Q9H2X6 1198 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 CYTL1Q9NRR1 136 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 FBXL17Q9UF56 701 aa7.37□□□□□ -1.23
PTPRE-207ENST00000471218 STRAPQ9Y3F4 350 aaKnown RBP7.37□□□□□ -1.23
PTPRE-207ENST00000471218 NUDT19A8MXV4 375 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 UMAD1C9J7I0 102 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 VENTXO95231 258 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM50AO95807 157 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 IFNA17P01571 189 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 SEC11BP0C7V7 166 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 SAA1P0DJI8 122 aaPredicted RBP7.36□□□□□ -1.23
PTPRE-207ENST00000471218 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
PTPRE-207ENST00000471218 LCN2P80188 198 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 PRCDQ00LT1 54 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 EXOSC2Q13868 293 aaKnown RBP7.36□□□□□ -1.23
PTPRE-207ENST00000471218 EBI3Q14213 229 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 AANATQ16613 207 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms