RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 ZFAND6Q6FIF0 208 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 MZT2AQ6P582 158 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 ZNF818PQ6ZRF7 136 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 SLC2A9Q9NRM0 540 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 C19orf73Q9NVV2 129 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 COMMD3Q9UBI1 195 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
C9orf3-212ENST00000468164 TRAV3A0A0B4J244 114 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 XRCC3O43542 346 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 PMP2P02689 132 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 LYL1P12980 280 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 RPL5P46777 297 aaKnown RBP10.18□□□□□ -0.78
C9orf3-212ENST00000468164 RFX2P48378 723 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 CTF1Q16619 201 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-212ENST00000468164 ZBTB34Q8NCN2 500 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 CACNG8Q8WXS5 425 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 EEF1AKMT3Q96AZ1 226 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 AIFM2Q9BRQ8 373 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 COMMD5Q9GZQ3 224 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 NAA50Q9GZZ1 169 aaKnown RBP10.18□□□□□ -0.78
C9orf3-212ENST00000468164 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 SIGLEC8Q9NYZ4 499 aa10.18□□□□□ -0.78
C9orf3-212ENST00000468164 C2orf70A6NJV1 201 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 S1PR2O95136 353 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 HPRT1P00492 218 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 RLN1P04808 185 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 FOLR2P14207 255 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 NQO2P16083 231 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 TAS2R31P59538 309 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 TAS2R20P59543 309 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 HAGHQ16775 308 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 OR5H2Q8NGV7 314 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 OR4A5Q8NH83 315 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 GIMAP1Q8WWP7 306 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 NEURL2Q9BR09 285 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 ZNF2Q9BSG1 426 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-212ENST00000468164 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 SLC2A8Q9NY64 477 aa10.17□□□□□ -0.78
C9orf3-212ENST00000468164 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
C9orf3-212ENST00000468164 MFSD2BA6NFX1 497 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CGB1A6NKQ9 187 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 A8MZ25 164 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 UPK2O00526 184 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 RBFOX2O43251 390 aaKnown RBP eCLIP10.16□□□□□ -0.783e-7■■■□□ 17.8
C9orf3-212ENST00000468164 TPPPO94811 219 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CRYGCP07315 174 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CD7P09564 240 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 HIST1H1BP16401 226 aaKnown RBP10.16□□□□□ -0.78
C9orf3-212ENST00000468164 ZNF182P17025 639 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CTRB1P17538 263 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 OR2B8PP59922 312 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 ERVK-16P61578 105 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 MSMO1Q15800 293 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 FAM209BQ5JX69 171 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CTRB2Q6GPI1 263 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 OR10W1Q8NGF6 305 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 RAB2BQ8WUD1 216 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 ISOC1Q96CN7 298 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 WDR89Q96FK6 387 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-212ENST00000468164 CMTM3Q96MX0 182 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 THAP7Q9BT49 309 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-212ENST00000468164 HINT2Q9BX68 163 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 RETNQ9HD89 108 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 DMRT1Q9Y5R6 373 aa10.16□□□□□ -0.78
C9orf3-212ENST00000468164 IGHV3-35A0A0C4DH35 117 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 FAM25AB3EWG3 89 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 FAM25CB3EWG5 89 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 FAM25GB3EWG6 89 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 APOA1P02647 267 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 IFNA6P05013 189 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 HLA-DMAP28067 261 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 GNRHRP30968 328 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 GPR183P32249 361 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 PRSS3P35030 304 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 TMBIM6P55061 237 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 DEFB125Q8N687 156 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 BORCS5Q969J3 196 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 FAM110AQ9BQ89 295 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 GAR1Q9NY12 217 aaKnown RBP10.15□□□□□ -0.78
C9orf3-212ENST00000468164 CEPT1Q9Y6K0 416 aa10.15□□□□□ -0.78
C9orf3-212ENST00000468164 IGLV11-55A0A075B6I3 123 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 IGLC7A0M8Q6 106 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 ZNF785A8K8V0 405 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 OR11H12B2RN74 326 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 KRASP01116 189 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 CLEC3BP05452 202 aa10.14□□□□□ -0.79
C9orf3-212ENST00000468164 EIF4EP06730 217 aaKnown RBP10.14□□□□□ -0.79
C9orf3-212ENST00000468164 CBLN1P23435 193 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms