RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TMEM56Q96MV1 263 aa10.34□□□□□ -0.75
COMMD3-205ENST00000463688 ATP6V0BQ99437 205 aa10.34□□□□□ -0.75
COMMD3-205ENST00000463688 QTRT1Q9BXR0 403 aaKnown RBP10.34□□□□□ -0.75
COMMD3-205ENST00000463688 ALX4Q9H161 411 aaPredicted RBP10.34□□□□□ -0.75
COMMD3-205ENST00000463688 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
COMMD3-205ENST00000463688 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
COMMD3-205ENST00000463688 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 PMP2P02689 132 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 GP9P14770 177 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 HRH1P35367 487 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 RFX2P48378 723 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 SSBP2P81877 361 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 C15orf32Q32M92 178 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 ZNF818PQ6ZRF7 136 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 LAX1Q8IWV1 398 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 OR5B3Q8NH48 314 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 CASTOR1Q8WTX7 329 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 RAB2BQ8WUD1 216 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 FCAMRQ8WWV6 532 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 AKIP1Q9NQ31 210 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 UPK2O00526 184 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 SERPINE2P07093 398 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 TRAPPC2P0DI81 140 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 TRAPPC2BP0DI82 140 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 HLA-DMAP28067 261 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 KLK9Q2XQG4 91 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 RNASE10Q5GAN6 216 aaKnown RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 SSX9Q7RTT3 188 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 PALMDQ9NP74 551 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
COMMD3-205ENST00000463688 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 KLK9Q9UKQ9 250 aa10.33□□□□□ -0.76
COMMD3-205ENST00000463688 MEIS3P1A6NDR6 274 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 MARCH11A6NNE9 402 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 EIF4EP06730 217 aaKnown RBP10.32□□□□□ -0.76
COMMD3-205ENST00000463688 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 GPHB5Q86YW7 130 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 SNX29P2Q8IUI4 249 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 ZFAND1Q8TCF1 268 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 WWC2-AS2Q96NR7 200 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 PRR25Q96S07 402 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 SORL1Q92673 2214 aa10.32□□□□□ -0.76
COMMD3-205ENST00000463688 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 LGALS9O00182 355 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 RGS5O15539 181 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 HPGDSO60760 199 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 OR2J3O76001 311 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 RLN1P04808 185 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 CTRB1P17538 263 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 ELK1P19419 428 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 TMBIM6P55061 237 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 TAS2R19P59542 299 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 OR2B8PP59922 312 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 MEF2DQ14814 521 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 CTF1Q16619 201 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 MRGPRG-AS1Q2M3A8 158 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 CTRB2Q6GPI1 263 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 CCDC71LQ8N9Z2 235 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 VN1R17PQ8TDU5 208 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 DYNLRB2Q8TF09 96 aa10.31□□□□□ -0.76
COMMD3-205ENST00000463688 LSM10Q969L4 123 aaKnown RBP10.31□□□□□ -0.76
COMMD3-205ENST00000463688 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-205ENST00000463688 APELAP0DMC3 54 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 SPNP16150 400 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 PTBP1P26599 531 aaKnown RBP eCLIP10.3□□□□□ -0.76
COMMD3-205ENST00000463688 TGFBR1P36897 503 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 LYSMD2Q8IV50 215 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 SCGB3A2Q96PL1 93 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 SLC2A8Q9NY64 477 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 EXTL2Q9UBQ6 330 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 U3KQK5 164 aa10.3□□□□□ -0.76
COMMD3-205ENST00000463688 A8MZ25 164 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 GABARAPH6UMI1 98 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 SCGB2A1O75556 95 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 KRASP01116 189 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 FCER2P06734 321 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 PTHLHP12272 177 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 MYOD1P15172 320 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 LPAR6P43657 344 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 RPL5P46777 297 aaKnown RBP10.29□□□□□ -0.76
COMMD3-205ENST00000463688 BRWD1-AS2P59051 145 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 SPSB3Q6PJ21 355 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 H2BFWTQ7Z2G1 175 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 GDPD1Q8N9F7 314 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 OR4A16Q8NH70 328 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
COMMD3-205ENST00000463688 RSL24D1Q9UHA3 163 aaKnown RBP10.29□□□□□ -0.76
COMMD3-205ENST00000463688 HMX3A6NHT5 357 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms