RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FYTTD1Q96QD9 318 aaKnown RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 OR4F4Q96R69 305 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 TP53RKQ96S44 253 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 SDHCQ99643 169 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 RTBDNQ9BSG5 229 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 ENY2Q9NPA8 101 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 TPSG1Q9NRR2 321 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 COA4Q9NYJ1 87 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 LINC00527Q9UJ94 153 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 VSIG4Q9Y279 399 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 TSSC4Q9Y5U2 329 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 WSB1Q9Y6I7 421 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 SVEP1Q4LDE5 3571 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 A0A0B4J2A0 478 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 A0A0G2JLM5 398 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 MSGN1A6NI15 193 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 G3V318 75 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 ARPC1BO15143 372 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 CDS2O95674 445 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 IFNA21P01568 189 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 IFNA17P01571 189 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 IGHG4P01861 327 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 TCRBP04435 133 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 OR9G9P0C7N8 305 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 TRAPPC2P0DI81 140 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 TRAPPC2BP0DI82 140 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 DEFA4P12838 97 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 BRWD1-AS2P59051 145 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 PJVKQ0ZLH3 352 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 ASAH1Q13510 395 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 SP6Q3SY56 376 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF585BQ52M93 769 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 FAM209BQ5JX69 171 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 PLET1Q6UQ28 207 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 SLC35G3Q8N808 338 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 C11orf44Q8N8P7 122 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 OR1L6Q8NGR2 347 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 CASTOR1Q8WTX7 329 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 LSM10Q969L4 123 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 RBMXL1Q96E39 390 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 SEC22AQ96IW7 307 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 CITED1Q99966 193 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 SRSF8Q9BRL6 282 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 FAM103A1Q9BTL3 118 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 HINT2Q9BX68 163 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 C20orf85Q9H1P6 137 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 GPN1Q9HCN4 374 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 THYN1Q9P016 225 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 SHPKQ9UHJ6 478 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF257Q9Y2Q1 563 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 OR51B2Q9Y5P1 312 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 NUBP2Q9Y5Y2 271 aa5.02□□□□□ -1.61
SF3B1-206ENST00000462613 FBN1P35555 2871 aaKnown RBP5.02□□□□□ -1.61
SF3B1-206ENST00000462613 STAB1Q9NY15 2570 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TRAV6A0A075B6T7 132 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 C13orf42A0A1B0GVH6 325 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 LINC01548A6NM66 108 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 C15orf61A6NNL5 157 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 PLA2G10O15496 165 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 SFT2D2O95562 160 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 PF4P02776 101 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TRGV3P03979 118 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 OR4E1P0C645 316 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 SULT1A3P0DMM9 295 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 SULT1A4P0DMN0 295 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 CD28P10747 220 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 HIST1H1BP16401 226 aaKnown RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 SNCAP37840 140 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 SUB1P53999 127 aaKnown RBP eCLIP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TPPP2P59282 170 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 OR2B8PP59922 312 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 RPL23AP62750 156 aaKnown RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 ERHP84090 104 aaKnown RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 NDPQ00604 133 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 CD83Q01151 205 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 PPP1R1AQ13522 171 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TMEM187Q14656 261 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 NSUN5P1Q3KNT7 163 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF429Q86V71 674 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 ADAD2Q8NCV1 583 aaKnown RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 KLHL30-AS1Q8NEE0 82 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 OR5T1Q8NG75 326 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 FAM110DQ8TAY7 271 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 GLYATL2Q8WU03 294 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TMEM230Q96A57 120 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 USMG5Q96IX5 58 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 CITED2Q99967 270 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 ALX4Q9H161 411 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 PLEKHA3Q9HB20 300 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 PALMDQ9NP74 551 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-206ENST00000462613 NUDT15Q9NV35 164 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TMED3Q9Y3Q3 217 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 TMEM56-RWDD3S4R434 201 aa5.01□□□□□ -1.61
SF3B1-206ENST00000462613 A0A1W2PRX2 142 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 FAM223BA6NKX1 122 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 NPIPB5A8MRT5 1133 aa5□□□□□ -1.61
SF3B1-206ENST00000462613 WRBO00258 174 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms