RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 DHRS11Q6UWP2 260 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 H2BFWTQ7Z2G1 175 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 ARRDC1Q8N5I2 433 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 OR1L6Q8NGR2 347 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 DGCR14Q96DF8 476 aaKnown RBP6.94□□□□□ -1.3
DDX39B-216ENST00000462421 ZNF486Q96H40 463 aaPredicted RBP6.94□□□□□ -1.3
DDX39B-216ENST00000462421 DIRAS2Q96HU8 199 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 SCGB3A2Q96PL1 93 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
DDX39B-216ENST00000462421 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
DDX39B-216ENST00000462421 SLC2A9Q9NRM0 540 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 RSL24D1Q9UHA3 163 aaKnown RBP6.94□□□□□ -1.3
DDX39B-216ENST00000462421 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
DDX39B-216ENST00000462421 MEGF8Q7Z7M0 2845 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 SOX15O60248 233 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 B3GALNT1O75752 331 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 OR2J3O76001 311 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 BRI3O95415 125 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 RAB3DO95716 219 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 KRASP01116 189 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 FGF2P09038 288 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 TRAPPC2P0DI81 140 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 TRAPPC2BP0DI82 140 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 SMIM18P0DKX4 95 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 RPA2P15927 270 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 GNRHRP30968 328 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 LPAR6P43657 344 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 SYNJ2BPP57105 145 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 AP3S2P59780 193 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 C15orf32Q32M92 178 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 TTC9CQ8N5M4 171 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 ADAD2Q8NCV1 583 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 OR1L8Q8NGR8 309 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 GPX8Q8TED1 209 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 DLX4Q92988 240 aaPredicted RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 LSM10Q969L4 123 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 RRNAD1Q96FB5 475 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 CCDC59Q9P031 241 aaKnown RBP6.93□□□□□ -1.3
DDX39B-216ENST00000462421 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
DDX39B-216ENST00000462421 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 TRBV7-1A0A0A6YYK4 115 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 TEX13DA0A0J9YY54 714 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 HMX3A6NHT5 357 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 GABARAPH6UMI1 98 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 M0QYG6 137 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 GGCTO75223 188 aaKnown RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 S1PR2O95136 353 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 NHLRC4P0CG21 123 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 NAT1P18440 290 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PSMB6P28072 239 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 ARL3P36405 182 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PPP5CP53041 499 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 SUB1P53999 127 aaKnown RBP eCLIP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 ERHP84090 104 aaKnown RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 CTF1Q16619 201 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 C19orf54Q5BKX5 351 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 VAX1Q5SQQ9 334 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 STEAP1BQ6NZ63 245 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 ACSM6Q6P461 480 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 TBC1D26Q86UD7 250 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PUSL1Q8N0Z8 303 aaKnown RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 SLC35G3Q8N808 338 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PRR25Q96S07 402 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 FXYD6Q9H0Q3 95 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 AKIP1Q9NQ31 210 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 FAM212BQ9NTI7 297 aaPredicted RBP6.92□□□□□ -1.3
DDX39B-216ENST00000462421 SCP2D1Q9UJQ7 156 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 OR51B2Q9Y5P1 312 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 WNK1Q9H4A3 2382 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
DDX39B-216ENST00000462421 WI2-2373I1.2A0A1W2PRP0 233 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 UPK2O00526 184 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 IGLV2-14P01704 120 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 PRH1P02810 166 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 ZNF735P0CB33 412 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 AKAIN1P0CW23 69 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 ANXA3P12429 323 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 GP9P14770 177 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 BMI1P35226 326 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 G6PCP35575 357 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 SNCAP37840 140 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 UCP3P55916 312 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 PIGPP57054 158 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 KRTAP10-11P60412 298 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 C10orf55Q5SWW7 151 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 SLC25A24Q6NUK1 477 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 ZNF343Q6P1L6 599 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 Q8N402 240 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 TMEM229BQ8NBD8 167 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 OR5B3Q8NH48 314 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms