RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 NQO2P16083 231 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 HIST1H1BP16401 226 aaKnown RBP6.94□□□□□ -1.3
BRCA1-207ENST00000461798 CTRB1P17538 263 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 HLA-GP17693 338 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 GNRHRP30968 328 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 CATR1Q13166 79 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 CTRB2Q6GPI1 263 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 LCN12Q6JVE5 192 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 GPHB5Q86YW7 130 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 LAX1Q8IWV1 398 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 MUC7Q8TAX7 377 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 CD300LFQ8TDQ1 290 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
BRCA1-207ENST00000461798 PLEKHA2Q9HB19 425 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
BRCA1-207ENST00000461798 IGLV11-55A0A075B6I3 123 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 DPPA5A6NC42 116 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 IZUMO1RA6ND01 250 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 SULT1C2O00338 296 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 UPK2O00526 184 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 TNFSF12O43508 249 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 AREGP15514 252 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 TGFBR1P36897 503 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 OR2B8PP59922 312 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 UBE2NLQ5JXB2 153 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 LINC00322Q6ZN03 302 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-207ENST00000461798 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 SSX9Q7RTT3 188 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 TSPAN14Q8NG11 270 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 CMTM3Q96MX0 182 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
BRCA1-207ENST00000461798 TECRQ9NZ01 308 aaKnown RBP6.93□□□□□ -1.3
BRCA1-207ENST00000461798 TRAV3A0A0B4J244 114 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 PPP5D1E7EU14 171 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 OR2C1O95371 312 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 TNFAIP8O95379 198 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 MYOD1P15172 320 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 PRSS3P35030 304 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 TAS2R20P59543 309 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 FXYD4P59646 89 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 HAGHQ16775 308 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 CD300EQ496F6 205 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-207ENST00000461798 CASC10Q5T4H9 136 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 THOC7Q6I9Y2 204 aaKnown RBP6.92□□□□□ -1.3
BRCA1-207ENST00000461798 C19orf35Q6ZS72 473 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 LYSMD2Q8IV50 215 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 SAMD12Q8N8I0 201 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 SLC25A46Q96AG3 418 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 EEF1AKMT3Q96AZ1 226 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 MOB3AQ96BX8 217 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 EDA2RQ9HAV5 297 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 VCX3AQ9NNX9 186 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
BRCA1-207ENST00000461798 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 MEIS3P1A6NDR6 274 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 A8MWP6 167 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 PGLYRP1O75594 196 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-207ENST00000461798 FCER2P06734 321 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 DEFA4P12838 97 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 FOLR2P14207 255 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 CBLN1P23435 193 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 F2RP25116 425 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 PTBP1P26599 531 aaKnown RBP eCLIP6.91□□□□□ -1.3
BRCA1-207ENST00000461798 RFX2P48378 723 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 TAS2R46P59540 309 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 HERV-K104P61576 105 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 FAM106AQ4KMX7 169 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 TMEM69Q5SWH9 247 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 CLEC19AQ6UXS0 136 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 HSD17B13Q7Z5P4 300 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-207ENST00000461798 OR6F1Q8NGZ6 308 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 GPX8Q8TED1 209 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 CXorf58Q96LI9 332 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 COMMD5Q9GZQ3 224 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 TUBA4BQ9H853 241 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 HRASLSQ9HDD0 168 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 IFT46Q9NQC8 304 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 TMEM140Q9NV12 185 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 SLC2A8Q9NY64 477 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 EHFQ9NZC4 300 aa6.91□□□□□ -1.3
BRCA1-207ENST00000461798 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 TMEM213A2RRL7 107 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 S1PR2O95136 353 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 HLA-AP01891 365 aaKnown RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 APOA1P02647 267 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 PMP2P02689 132 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 CLEC3BP05452 202 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 TRAPPC2P0DI81 140 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 TRAPPC2BP0DI82 140 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms