RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NABP2Q9BQ15 211 aa16.46■□□□□ 0.23
CCM2-203ENST00000461377 ACTR3CQ9C0K3 210 aaPredicted RBP16.46■□□□□ 0.23
CCM2-203ENST00000461377 SLC25A22Q9H936 323 aa16.46■□□□□ 0.23
CCM2-203ENST00000461377 RALYQ9UKM9 306 aaKnown RBP16.46■□□□□ 0.23
CCM2-203ENST00000461377 PUS1Q9Y606 427 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCM2-203ENST00000461377 IFNA1P01562 189 aa16.46■□□□□ 0.22
CCM2-203ENST00000461377 IFNA4P05014 189 aa16.46■□□□□ 0.22
CCM2-203ENST00000461377 PRCDQ00LT1 54 aa16.46■□□□□ 0.22
CCM2-203ENST00000461377 ZNF841Q6ZN19 808 aa16.46■□□□□ 0.22
CCM2-203ENST00000461377 SMCO3A2RU48 225 aa16.45■□□□□ 0.22
CCM2-203ENST00000461377 COLCA2A8K830 154 aa16.45■□□□□ 0.22
CCM2-203ENST00000461377 H3BQ15 152 aa16.45■□□□□ 0.22
CCM2-203ENST00000461377 SOX15O60248 233 aa16.45■□□□□ 0.22
CCM2-203ENST00000461377 EIF3GO75821 320 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCM2-203ENST00000461377 REG1BP48304 166 aa16.45■□□□□ 0.22
CCM2-203ENST00000461377 SMG1Q96Q15 3661 aaKnown RBP16.44■□□□□ 0.22
CCM2-203ENST00000461377 H7C2Y5 167 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 CA2P00918 260 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 CEBPGP53567 150 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 DIAPH2-AS1Q14236 149 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 ACOT6Q3I5F7 207 aaPredicted RBP16.44■□□□□ 0.22
CCM2-203ENST00000461377 FAM122CQ6P4D5 195 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 C15orf54Q8N8G6 183 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 HARBI1Q96MB7 349 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 P2RX4Q99571 388 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 TMEM133Q9H2Q1 129 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 TUBA4BQ9H853 241 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 FKBP11Q9NYL4 201 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 VAX2Q9UIW0 290 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 TEX50A0A1B0GTY4 177 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 PDPNQ86YL7 162 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 PLEKHA3Q9HB20 300 aa16.44■□□□□ 0.22
CCM2-203ENST00000461377 KALRNO60229 2985 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 CYB5BO43169 146 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 FAM90A2PQ658T7 463 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 OR5B3Q8NH48 314 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 RAB24Q969Q5 203 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 FLYWCH2Q96CP2 140 aaKnown RBP16.43■□□□□ 0.22
CCM2-203ENST00000461377 MGST2Q99735 147 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 PCGF1Q9BSM1 259 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 HINT2Q9BX68 163 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 CBLN4Q9NTU7 201 aa16.43■□□□□ 0.22
CCM2-203ENST00000461377 OPRK1P41145 380 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 RBMS3Q6XE24 437 aaKnown RBP16.42■□□□□ 0.22
CCM2-203ENST00000461377 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
CCM2-203ENST00000461377 SEC14L6B5MCN3 397 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 HMGB3O15347 200 aaKnown RBP16.42■□□□□ 0.22
CCM2-203ENST00000461377 ARSJQ5FYB0 599 aaPredicted RBP16.42■□□□□ 0.22
CCM2-203ENST00000461377 C11orf71Q6IPW1 123 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 OR4C13Q8NGP0 309 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 C1orf159Q96HA4 380 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 GGTLC1Q9BX51 225 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 NPVFQ9HCQ7 196 aa16.42■□□□□ 0.22
CCM2-203ENST00000461377 ANKHD1Q8IWZ3 2542 aaKnown RBP16.42■□□□□ 0.22
CCM2-203ENST00000461377 IL3RAP26951 378 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 AVPI1Q5T686 147 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 TGIF2LXQ8IUE1 241 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 NIPSNAP3BQ9BS92 247 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 WASHC3Q9Y3C0 194 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 ATRXP46100 2492 aa16.41■□□□□ 0.22
CCM2-203ENST00000461377 FNDC10F2Z333 226 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 OPN1MWP04001 364 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 OPN1MW2P0DN77 364 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 OPN1MW3P0DN78 364 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 CDC34P49427 236 aaPredicted RBP16.4■□□□□ 0.22
CCM2-203ENST00000461377 ATP5IP56385 69 aaPredicted RBP16.4■□□□□ 0.22
CCM2-203ENST00000461377 OR4A5Q8NH83 315 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 TMEM167AQ8TBQ9 72 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 TNFRSF14Q92956 283 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 TVP23CQ96ET8 276 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 TMPRSS5Q9H3S3 457 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 ZZEF1O43149 2961 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 YIF1AO95070 293 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 RAB13P51153 203 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 FLI1Q01543 452 aaPredicted RBP16.4■□□□□ 0.22
CCM2-203ENST00000461377 BSXQ3C1V8 233 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 SLC35E3Q7Z769 313 aa16.4■□□□□ 0.22
CCM2-203ENST00000461377 IGLV2-23P01705 113 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 RBP4P02753 201 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 USF1P22415 310 aaPredicted RBP16.39■□□□□ 0.21
CCM2-203ENST00000461377 TAGLN2P37802 199 aaKnown RBP16.39■□□□□ 0.21
CCM2-203ENST00000461377 GCSAMLQ5JQS6 135 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 VSTM2AQ8TAG5 236 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 C8orf46Q8TAG6 207 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 HIST1H2BAQ96A08 127 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 NEIL1Q96FI4 390 aaPredicted RBP16.39■□□□□ 0.21
CCM2-203ENST00000461377 MANBALQ9NQG1 85 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 PXMP4Q9Y6I8 212 aa16.39■□□□□ 0.21
CCM2-203ENST00000461377 IGHV2-26A0A0B4J1V2 119 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 A0A1W2PPH5 198 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 DEFA4P12838 97 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 RPL8P62917 257 aaKnown RBP16.38■□□□□ 0.21
CCM2-203ENST00000461377 C2orf83Q53S99 150 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 OR8B3Q8NGG8 313 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 RAB1CQ92928 201 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 OR8B2Q96RD0 313 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 NDUFA4L2Q9NRX3 87 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 KCNIP2Q9NS61 270 aa16.38■□□□□ 0.21
CCM2-203ENST00000461377 MIOXQ9UGB7 285 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms