RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 CENPVL1A0A0U1RR11 272 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 PATE3B3GLJ2 98 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 OR5P3Q8WZ94 311 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 RPRMQ9NS64 109 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 GGTLC3B5MD39 225 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 TGFAP01135 160 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 CRPP02741 224 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 APOBEC3AP31941 199 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 SRSF6Q13247 344 aaKnown RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 PRSS53Q2L4Q9 553 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 NRTNQ99748 197 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 PRDM13Q9H4Q3 707 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 DPM3Q9P2X0 92 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 LDLRAD4O15165 306 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV4-39P01824 125 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 LINC00614P0C842 121 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 ASCL2Q99929 193 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 C5orf67F2Z3F1 127 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 SIGLEC5O15389 551 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 MYOD1P15172 320 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 NEU4Q8WWR8 484 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 ARPC1AQ92747 370 aa7.64□□□□□ -1.19
BRCA1-205ENST00000461221 RCC1LQ96I51 464 aaKnown RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 AHDC1Q5TGY3 1603 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-205ENST00000461221 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 PLNP26678 52 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 TMEM54Q969K7 222 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 SLC50A1Q9BRV3 221 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 OTORQ9NRC9 128 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 ZNF257Q9Y2Q1 563 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 PAPPA2Q9BXP8 1791 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 A0A087WWC5 75 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 DUSP14O95147 198 aaKnown RBP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CGAP01215 116 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CD8AP01732 235 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 SAA1P0DJI8 122 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 HTN3P15516 51 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CACNG8Q8WXS5 425 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 AMELYQ99218 206 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 TMEM14DPA8MWL7 114 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 H3BUT2 72 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 C1QTNF12Q5T7M4 302 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CD200R1LQ6Q8B3 271 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 VGLL1Q99990 258 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 TFF2Q03403 129 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 SNAI2O43623 268 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 ZNF708P17019 499 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 CKS1BP61024 79 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 SRSF1Q07955 248 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-205ENST00000461221 GP6Q9HCN6 339 aa7.63□□□□□ -1.19
BRCA1-205ENST00000461221 EVPLQ92817 2033 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 TTC3P53804 2025 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3OR16-13A0A075B7E8 117 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3-74A0A0B4J1X5 117 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3-35A0A0C4DH35 117 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3-66A0A0C4DH42 116 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 DPM2O94777 84 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3-23P01764 117 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 CELA2AP08217 269 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 CACNA1SQ13698 1873 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3OR16-10A0A075B7F0 116 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IGFBP2P18065 325 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 H2BFSP57053 126 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 SSC4DQ8WTU2 575 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ST6GALNAC6Q969X2 333 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 Q9H3A6 140 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ZNF703Q9H7S9 590 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-205ENST00000461221 DDX60LQ5H9U9 1706 aaKnown RBP7.62□□□□□ -1.19
BRCA1-205ENST00000461221 SCO2A0A1W2PP80 73 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 EFNB1P98172 346 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ORMDL2Q53FV1 153 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 RPL39P5Q59GN2 51 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 TIMM23BQ5SRD1 257 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 STHQ8IWL8 128 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 SMRP1Q8NCR6 262 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 PILRAQ9UKJ1 303 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 CYSLTR1Q9Y271 337 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 NPIPB13A6NJU9 1138 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 TDGF1P3P51864 188 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 IFITM3Q01628 133 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ZNF585BQ52M93 769 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ASPHD2Q6ICH7 369 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 ACP7Q6ZNF0 438 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 RREB1Q92766 1687 aa7.62□□□□□ -1.19
BRCA1-205ENST00000461221 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 A8MWV9 139 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 IGKV1D-33P01593 117 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 IGKV1-33P01594 117 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms