RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 KLK6Q92876 244 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 CAPZA3Q96KX2 299 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 HSPB9Q9BQS6 159 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 TM2D3Q9BRN9 247 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 UBQLN4Q9NRR5 601 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 LYRM2Q9NU23 88 aaPredicted RBP2.76□□□□□ -1.97
CCDC50-203ENST00000460064 MRC2Q9UBG0 1479 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 IGHV1-45A0A0A0MS14 117 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 TRAV26-2A0A0B4J265 109 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 OR5H14A6NHG9 310 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 G3V2T6 193 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 PFDN1O60925 122 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 POP7O75817 140 aaKnown RBP2.75□□□□□ -1.97
CCDC50-203ENST00000460064 IFNA10P01566 189 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 IGHV3-53P01767 116 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 HBZP02008 142 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 P0C880 135 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 CPMP14384 443 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 CTLA4P16410 223 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 SPI1P17947 270 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 DDTP30046 118 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 FOXA1P55317 472 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
CCDC50-203ENST00000460064 GRK1Q15835 563 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 ZNF141Q15928 474 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 BATFQ16520 125 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 LGALSLQ3ZCW2 172 aaPredicted RBP2.75□□□□□ -1.97
CCDC50-203ENST00000460064 LCN8Q6JVE9 175 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 SCGB1D4Q6XE38 83 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 FAM19A3Q7Z5A8 133 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 RPRMLQ8N4K4 120 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 BPIFB6Q8NFQ5 453 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 OR8B12Q8NGG6 310 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 JOSD2Q8TAC2 188 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 C1orf54Q8WWF1 131 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 ACOT12Q8WYK0 555 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 C14orf144Q96I85 54 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 HES4Q9HCC6 221 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 ACER3Q9NUN7 267 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 RSL24D1Q9UHA3 163 aaKnown RBP2.75□□□□□ -1.97
CCDC50-203ENST00000460064 PLCH2O75038 1416 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 SPATA31E1Q6ZUB1 1445 aa2.75□□□□□ -1.97
CCDC50-203ENST00000460064 HECW2Q9P2P5 1572 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 NISCHQ9Y2I1 1504 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 RIMS1Q86UR5 1692 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 A6NED7 52 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 ARL5CA6NH57 179 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 SIGLEC16A6NMB1 481 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 E7EQ34 232 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 SERPINE1P05121 402 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 CSN2P05814 226 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 LGALS1P09382 135 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 SMIM6P0DI80 62 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 MPC1LP0DKB6 136 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 CGB3P0DN86 165 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 CGB7P0DN87 165 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 ZNF25P17030 456 aaPredicted RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 RPL7P18124 248 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 NCALDP61601 193 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 RRAS2P62070 204 aaPredicted RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 FABP5Q01469 135 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM267Q0VDI3 215 aaPredicted RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 PAFAH1B3Q15102 231 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 EBPQ15125 230 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 OR8B8Q15620 311 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 KCNJ8Q15842 424 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 LAIR2Q6ISS4 152 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 C20orf196Q8IYI0 205 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 CMTM2Q8TAZ6 248 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 GPR119Q8TDV5 335 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM203Q969S6 136 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 SLC25A44Q96H78 314 aaPredicted RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 SLC35G5Q96KT7 338 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 IGF2BP2-AS1Q96M15 143 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 HSPB8Q9UJY1 196 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 RBM7Q9Y580 266 aaKnown RBP2.74□□□□□ -1.97
CCDC50-203ENST00000460064 MIA2Q96PC5 1412 aa2.74□□□□□ -1.97
CCDC50-203ENST00000460064 CACNA1SQ13698 1873 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 NUP205Q92621 2012 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 SHROOM3Q8TF72 1996 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 MEIKINA0A087WXM9 373 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 A0A1B0GVG6 124 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 C5orf49A4QMS7 147 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 GGTLC3B5MD39 225 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 H3BMM0 161 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 H7C1C5 153 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 COPEO14579 308 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 GADD45GO95257 159 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 RPS3P23396 243 aaKnown RBP eCLIP2.73□□□□□ -1.97
CCDC50-203ENST00000460064 COL8A2P25067 703 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 BLVRBP30043 206 aaPredicted RBP2.73□□□□□ -1.97
CCDC50-203ENST00000460064 SNRPD2P62316 118 aaKnown RBP2.73□□□□□ -1.97
CCDC50-203ENST00000460064 LCN6P62502 163 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
CCDC50-203ENST00000460064 EMX2Q04743 252 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 TAF9Q16594 264 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 LTC4SQ16873 150 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 KRTAP25-1Q3LHN0 102 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 AGTRAPQ6RW13 159 aa2.73□□□□□ -1.97
CCDC50-203ENST00000460064 SBSNQ6UWP8 590 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms