RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 DMBX1Q8NFW5 382 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 FBXL7Q9UJT9 491 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 E7EUB6 86 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 GPR31O00270 319 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 UPK2O00526 184 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 CYB5BO43169 146 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
MSH6-207ENST00000456246 PGLYRP1O75594 196 aaPredicted RBP13.62□□□□□ -0.23
MSH6-207ENST00000456246 S1PR2O95136 353 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 RLN1P04808 185 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 DEFA4P12838 97 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 RCVRNP35243 200 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 HRH1P35367 487 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 OR2B8PP59922 312 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 HSD17B13Q7Z5P4 300 aaPredicted RBP13.62□□□□□ -0.23
MSH6-207ENST00000456246 SGPP2Q8IWX5 399 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 ASCL2Q99929 193 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 TMEM140Q9NV12 185 aa13.62□□□□□ -0.23
MSH6-207ENST00000456246 A0A1B0GW64 132 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 MARCH11A6NNE9 402 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 A8MZ25 164 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 CSN3P07498 182 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 FRMD6-AS1P0C7T7 363 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 AREGP15514 252 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 TSPAN5P62079 268 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 HAPLN4Q86UW8 402 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 EEF1AKMT3Q96AZ1 226 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 DGCR14Q96DF8 476 aaKnown RBP13.61□□□□□ -0.23
MSH6-207ENST00000456246 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 QTRT1Q9BXR0 403 aaKnown RBP13.61□□□□□ -0.23
MSH6-207ENST00000456246 FXYD6Q9H0Q3 95 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 FAM212BQ9NTI7 297 aaPredicted RBP13.61□□□□□ -0.23
MSH6-207ENST00000456246 THYN1Q9P016 225 aa13.61□□□□□ -0.23
MSH6-207ENST00000456246 TPPPO94811 219 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 SMIM18P0DKX4 95 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 CTF1Q16619 201 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 SNX29P2Q8IUI4 249 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 LYSMD2Q8IV50 215 aa13.6□□□□□ -0.23
MSH6-207ENST00000456246 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 CGB1A6NKQ9 187 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 LGALS9O00182 355 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 HPGDSO60760 199 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 ZNF182P17025 639 aaPredicted RBP13.59□□□□□ -0.23
MSH6-207ENST00000456246 ELK1P19419 428 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 SBSPONQ8IVN8 264 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 C15orf40Q8WUR7 153 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
MSH6-207ENST00000456246 ZMAT4Q9H898 229 aa13.59□□□□□ -0.23
MSH6-207ENST00000456246 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 NDUFB8O95169 186 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 IGHV4-30-4P0DP06 118 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 UCP3P55916 312 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 GPHB5Q86YW7 130 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 LAX1Q8IWV1 398 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 SLC38A6Q8IZM9 456 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 Q8N1Y9 231 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 OR1L8Q8NGR8 309 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 CCDC140Q96MF4 163 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
MSH6-207ENST00000456246 TRAV3A0A0B4J244 114 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 PPP5D1E7EU14 171 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 SNAPC5O75971 98 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 TRAPPC2P0DI81 140 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 TRAPPC2BP0DI82 140 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 MYOD1P15172 320 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 ARL3P36405 182 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 LPAR6P43657 344 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
MSH6-207ENST00000456246 FAM106AQ4KMX7 169 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 GPR107Q5VW38 600 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 CLEC19AQ6UXS0 136 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
MSH6-207ENST00000456246 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 DMRT1Q9Y5R6 373 aa13.57□□□□□ -0.24
MSH6-207ENST00000456246 KRASP01116 189 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 REG1AP05451 166 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 TBPP20226 339 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 GPR141Q7Z602 305 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 GDPD1Q8N9F7 314 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 OR5B3Q8NH48 314 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 LSM10Q969L4 123 aaKnown RBP13.56□□□□□ -0.24
MSH6-207ENST00000456246 RCHY1Q96PM5 261 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 NAA50Q9GZZ1 169 aaKnown RBP13.56□□□□□ -0.24
MSH6-207ENST00000456246 C19orf73Q9NVV2 129 aa13.56□□□□□ -0.24
MSH6-207ENST00000456246 C2orf70A6NJV1 201 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 A8MWP6 167 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 OR2C1O95371 312 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 IFNA6P05013 189 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms