RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 GPR31O00270 319 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 UPK2O00526 184 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 CRYGCP07315 174 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 F2RP25116 425 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 RCVRNP35243 200 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 TSPAN5P62079 268 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 IL34Q6ZMJ4 242 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 ASCL2Q99929 193 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 PEMTQ9UBM1 199 aa16.2■□□□□ 0.18
HMGB3-205ENST00000455596 CGB1A6NKQ9 187 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 FGF2P09038 288 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 HIST1H1BP16401 226 aaKnown RBP16.19■□□□□ 0.18
HMGB3-205ENST00000455596 ZNF182P17025 639 aaPredicted RBP16.19■□□□□ 0.18
HMGB3-205ENST00000455596 CTRB1P17538 263 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 ERVK-16P61578 105 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 CTRB2Q6GPI1 263 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 LPCAT3Q6P1A2 487 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 C19orf35Q6ZS72 473 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 COMMD5Q9GZQ3 224 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 SIGLEC8Q9NYZ4 499 aa16.19■□□□□ 0.18
HMGB3-205ENST00000455596 TRAV3A0A0B4J244 114 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 CSN3P07498 182 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 DEFA4P12838 97 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 OR2B8PP59922 312 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 DGCR14Q96DF8 476 aaKnown RBP16.18■□□□□ 0.18
HMGB3-205ENST00000455596 WWC2-AS2Q96NR7 200 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 FANCD2OSQ96PS1 177 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 U3KQK5 164 aa16.18■□□□□ 0.18
HMGB3-205ENST00000455596 MARCH11A6NNE9 402 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 H0Y980 276 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 NDUFB8O95169 186 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 REG1AP05451 166 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 RPA2P15927 270 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 S100GP29377 79 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 LPAR6P43657 344 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 FCAMRQ8WWV6 532 aa16.17■□□□□ 0.18
HMGB3-205ENST00000455596 SRSF8Q9BRL6 282 aaKnown RBP16.17■□□□□ 0.18
HMGB3-205ENST00000455596 PPP5D1E7EU14 171 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 GGCTO75223 188 aaKnown RBP16.16■□□□□ 0.18
HMGB3-205ENST00000455596 KLK9Q2XQG4 91 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 PHLDA2Q53GA4 152 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 THOC7Q6I9Y2 204 aaKnown RBP16.16■□□□□ 0.18
HMGB3-205ENST00000455596 EEF1AKMT3Q96AZ1 226 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 EXTL2Q9UBQ6 330 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 KLK9Q9UKQ9 250 aa16.16■□□□□ 0.18
HMGB3-205ENST00000455596 IGLC7A0M8Q6 106 aa16.15■□□□□ 0.18
HMGB3-205ENST00000455596 FRMD6-AS1P0C7T7 363 aa16.15■□□□□ 0.18
HMGB3-205ENST00000455596 ALDH3B2P48448 385 aa16.15■□□□□ 0.18
HMGB3-205ENST00000455596 LCN12Q6JVE5 192 aa16.15■□□□□ 0.18
HMGB3-205ENST00000455596 QTRT1Q9BXR0 403 aaKnown RBP16.15■□□□□ 0.18
HMGB3-205ENST00000455596 DMRT1Q9Y5R6 373 aa16.15■□□□□ 0.18
HMGB3-205ENST00000455596 IGLV11-55A0A075B6I3 123 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 KRASP01116 189 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 IGHV3-23P01764 117 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 G6PCP35575 357 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 ARL3P36405 182 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 UCP3P55916 312 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 ZNF585BQ52M93 769 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 RNASE12Q5GAN4 147 aaKnown RBP16.14■□□□□ 0.17
HMGB3-205ENST00000455596 CLEC19AQ6UXS0 136 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 Q8N402 240 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 CCDC140Q96MF4 163 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 S4R3C0 116 aa16.14■□□□□ 0.17
HMGB3-205ENST00000455596 TPPPO94811 219 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 TRAPPC2P0DI81 140 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 TRAPPC2BP0DI82 140 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 HSD17B13Q7Z5P4 300 aaPredicted RBP16.13■□□□□ 0.17
HMGB3-205ENST00000455596 TBC1D26Q86UD7 250 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 SBSPONQ8IVN8 264 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 SGPP2Q8IWX5 399 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 SLC38A6Q8IZM9 456 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 CADM3Q8N126 398 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 Q8N1Y9 231 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 OR1L8Q8NGR8 309 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 OR2K2Q8NGT1 345 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 C15orf40Q8WUR7 153 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 CXorf58Q96LI9 332 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 FAM212BQ9NTI7 297 aaPredicted RBP16.13■□□□□ 0.17
HMGB3-205ENST00000455596 THYN1Q9P016 225 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 KLK11Q9UBX7 282 aa16.13■□□□□ 0.17
HMGB3-205ENST00000455596 TRBV7-1A0A0A6YYK4 115 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 TEX50A0A1B0GTY4 177 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 M0QYG6 137 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 CYB5BO43169 146 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 SNAPC5O75971 98 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 OR2C1O95371 312 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 HLA-AP01891 365 aaKnown RBP16.12■□□□□ 0.17
HMGB3-205ENST00000455596 IFNA6P05013 189 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 RNASE10Q5GAN6 216 aaKnown RBP16.12■□□□□ 0.17
HMGB3-205ENST00000455596 OR10W1Q8NGF6 305 aa16.12■□□□□ 0.17
HMGB3-205ENST00000455596 LGALS9O00182 355 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 IGHV4-30-4P0DP06 118 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 MECP2P51608 486 aaKnown RBP16.11■□□□□ 0.17
HMGB3-205ENST00000455596 GTSCR1Q86UQ5 136 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 GPHB5Q86YW7 130 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 OR52I2Q8NH67 350 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 DYNLRB2Q8TF09 96 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 NSG2Q9Y328 171 aa16.11■□□□□ 0.17
HMGB3-205ENST00000455596 OR51B2Q9Y5P1 312 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms