RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 UPK2O00526 184 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 CYB5BO43169 146 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
LIMS1-210ENST00000449684 REG1AP05451 166 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
LIMS1-210ENST00000449684 F2RP25116 425 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 PSMB6P28072 239 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
LIMS1-210ENST00000449684 LYSMD2Q8IV50 215 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
LIMS1-210ENST00000449684 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
LIMS1-210ENST00000449684 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
LIMS1-210ENST00000449684 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 IFNA6P05013 189 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 MYOD1P15172 320 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 AREGP15514 252 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 LPAR6P43657 344 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 CTF1Q16619 201 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 FXYD6Q9H0Q3 95 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
LIMS1-210ENST00000449684 TRAV3A0A0B4J244 114 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 MARCH11A6NNE9 402 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 BMPR1BO00238 502 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 RGS5O15539 181 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
LIMS1-210ENST00000449684 SNAPC5O75971 98 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 KRASP01116 189 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 IGHV3-23P01764 117 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 CRYGCP07315 174 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 CTRB1P17538 263 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 OR2B8PP59922 312 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 CTRB2Q6GPI1 263 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 C15orf40Q8WUR7 153 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 QTRT1Q9BXR0 403 aaKnown RBP11.85□□□□□ -0.51
LIMS1-210ENST00000449684 THYN1Q9P016 225 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 U3KQK5 164 aa11.85□□□□□ -0.51
LIMS1-210ENST00000449684 A0A1B0GW64 132 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 PPP5D1E7EU14 171 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 NDUFB8O95169 186 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 CLEC19AQ6UXS0 136 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 DYNLRB2Q8TF09 96 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 FCAMRQ8WWV6 532 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 CXorf58Q96LI9 332 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
LIMS1-210ENST00000449684 SRSF8Q9BRL6 282 aaKnown RBP11.84□□□□□ -0.51
LIMS1-210ENST00000449684 DNAH9Q9NYC9 4486 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 M0QYG6 137 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 CSN3P07498 182 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 PGAM2P15259 253 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 G6PCP35575 357 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 ARL3P36405 182 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 RNASE10Q5GAN6 216 aaKnown RBP11.83□□□□□ -0.52
LIMS1-210ENST00000449684 THOC7Q6I9Y2 204 aaKnown RBP11.83□□□□□ -0.52
LIMS1-210ENST00000449684 TBC1D26Q86UD7 250 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 Q8N402 240 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 S4R3C0 116 aa11.83□□□□□ -0.52
LIMS1-210ENST00000449684 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 NOL3O60936 208 aaKnown RBP11.82□□□□□ -0.52
LIMS1-210ENST00000449684 OR2C1O95371 312 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
LIMS1-210ENST00000449684 FGF2P09038 288 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 OR13C7P0DN81 318 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 MECP2P51608 486 aaKnown RBP11.82□□□□□ -0.52
LIMS1-210ENST00000449684 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 IL34Q6ZMJ4 242 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-210ENST00000449684 CLVS1Q8IUQ0 354 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-210ENST00000449684 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 ZMAT4Q9H898 229 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 SIGLEC8Q9NYZ4 499 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 KLK11Q9UBX7 282 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 NSG2Q9Y328 171 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
LIMS1-210ENST00000449684 IGLV11-55A0A075B6I3 123 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 TEX50A0A1B0GTY4 177 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 IGLC7A0M8Q6 106 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 ZNF320A2RRD8 509 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 SERPINE2P07093 398 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 ALDH3B2P48448 385 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 UCP3P55916 312 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 OR10W1Q8NGF6 305 aa11.81□□□□□ -0.52
LIMS1-210ENST00000449684 OR52I2Q8NH67 350 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms