RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MIR17HGQ75NE6 70 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 TMEM251Q8N6I4 163 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 OR8B3Q8NGG8 313 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 OR1B1Q8NGR6 318 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 PHF7Q9BWX1 381 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-204ENST00000449510 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 PIEZO2Q9H5I5 2752 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 M0QZ24 198 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 M0R1B8 84 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBE3B-204ENST00000449510 FOXH1O75593 365 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 Q8IYB0 196 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 ALKBH7Q9BT30 221 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-204ENST00000449510 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
UBE3B-204ENST00000449510 ERHP84090 104 aaKnown RBP10.42□□□□□ -0.74
UBE3B-204ENST00000449510 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF645Q8N7E2 425 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 SEPSECSQ9HD40 501 aaKnown RBP10.42□□□□□ -0.74
UBE3B-204ENST00000449510 IL36GQ9NZH8 169 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 FREM2Q5SZK8 3169 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 ZGRF1Q86YA3 2104 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 VENTXO95231 258 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 MYOD1P15172 320 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 AARDQ4LEZ3 155 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 TM4SF20Q53R12 229 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 HAPLN4Q86UW8 402 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 RNF115Q9Y4L5 304 aa10.42□□□□□ -0.74
UBE3B-204ENST00000449510 ACTL10Q5JWF8 245 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 Q6ZWC4 215 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 CORO2AQ92828 525 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 HES4Q9HCC6 221 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 ANAPC10Q9UM13 185 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 IGHV3-72A0A0B4J1Y9 119 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 TNFSF13O75888 250 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 SFTPCP11686 197 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 OR10X1Q8NGY0 326 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 PGLYRP4Q96LB8 373 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 SCRT1Q9BWW7 348 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 IL36BQ9NZH7 164 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 TCF19Q9Y242 345 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 COX6A1P12074 109 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 MEOX1P50221 254 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 MOGAT3Q86VF5 341 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 SPEM1Q8N4L4 309 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 OR13A1Q8NGR1 328 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 LINC00479Q96M42 142 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 TWSG1Q9GZX9 223 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 ELOVL5Q9NYP7 299 aa10.41□□□□□ -0.74
UBE3B-204ENST00000449510 YLPM1P49750 1951 aaKnown RBP10.4□□□□□ -0.74
UBE3B-204ENST00000449510 TRGV5A0A0B4J1U4 118 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 TRAV1-1A0A0B4J248 108 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 PSPNO60542 156 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 REG1AP05451 166 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 IL6RP08887 468 aaPredicted RBP10.4□□□□□ -0.74
UBE3B-204ENST00000449510 IL11RAQ14626 422 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 MAJINQ3KP22 176 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 FA2HQ7L5A8 372 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 KCNS1Q96KK3 526 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 GSX1Q9H4S2 264 aaPredicted RBP10.4□□□□□ -0.74
UBE3B-204ENST00000449510 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF585BQ52M93 769 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 NABP2Q9BQ15 211 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 PRDM14Q9GZV8 571 aa10.4□□□□□ -0.74
UBE3B-204ENST00000449510 HCP5Q6MZN7 132 aa10.4□□□□□ -0.75
UBE3B-204ENST00000449510 VWA1Q6PCB0 445 aa10.4□□□□□ -0.75
UBE3B-204ENST00000449510 CD24P25063 80 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 UCP2P55851 309 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 PCSK4Q6UW60 755 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 CT55Q8WUE5 264 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 SPSB4Q96A44 273 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 TRAV3A0A0B4J244 114 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 COL8A1P27658 744 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 PRDX2P32119 198 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 RIPPLY3P57055 190 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 PRB3Q04118 309 aaPredicted RBP10.39□□□□□ -0.75
UBE3B-204ENST00000449510 RTL8BQ17RB0 113 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 FADS6Q8N9I5 356 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 OR2M7Q8NG81 312 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
UBE3B-204ENST00000449510 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 CNIH1O95406 144 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 CA2P00918 260 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 OR9G9P0C7N8 305 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 MAS1LP35410 378 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 MLANAQ16655 118 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 C1QTNF5Q9BXJ0 243 aa10.39□□□□□ -0.75
UBE3B-204ENST00000449510 THSD7BQ9C0I4 1608 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 PINLYPA6NC86 204 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 ZNF716A6NP11 495 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 LINC00869P0C866 280 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms