RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 LOC102724200A0A096LPH7 203 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-203ENST00000448549 TRBV7-1A0A0A6YYK4 115 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 IGHV3-35A0A0C4DH35 117 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 FGF9P31371 208 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-203ENST00000448549 FCGR2CP31995 323 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 OR2B8PP59922 312 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 ARPC4P59998 168 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 ANKRD55Q3KP44 614 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 SPAG16Q8N0X2 631 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 OR4A5Q8NH83 315 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 LGALS14Q8TCE9 139 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 VCX3BQ9H321 246 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
TRA2A-203ENST00000448549 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
TRA2A-203ENST00000448549 TRAV3A0A0B4J244 114 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 SULT1C2O00338 296 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 GPR183P32249 361 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 HSPA13P48723 471 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 UBE2UQ5VVX9 321 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
TRA2A-203ENST00000448549 TPRA1Q86W33 373 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 GVQW1Q8N7I0 195 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 BEST4Q8NFU0 473 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 OR13F1Q8NGS4 319 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 RHBDL2Q9NX52 303 aa11.59□□□□□ -0.55
TRA2A-203ENST00000448549 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 TRAV25A0A0B4J276 109 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 IGLC7A0M8Q6 106 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 FCER2P06734 321 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 PSMB9P28065 219 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 ZNF773Q6PK81 442 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 OR1L6Q8NGR2 347 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
TRA2A-203ENST00000448549 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
TRA2A-203ENST00000448549 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 UPK2O00526 184 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 RBFOX2O43251 390 aaKnown RBP eCLIP11.57□□□□□ -0.563e-12■□□□□ 8.2
TRA2A-203ENST00000448549 PPYP01298 95 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 PTBP1P26599 531 aaKnown RBP eCLIP11.57□□□□□ -0.565e-18■■□□□ 14.2
TRA2A-203ENST00000448549 TAS2R31P59538 309 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 GABARAPL2P60520 117 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 MSMO1Q15800 293 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 HOGA1Q86XE5 327 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 SPARTQ8N0X7 666 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 OR2C3Q8N628 320 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 OR5H6Q8NGV6 325 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 LINC00476Q8WZB0 136 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 COMMD5Q9GZQ3 224 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 SSR3Q9UNL2 185 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 UFC1Q9Y3C8 167 aa11.57□□□□□ -0.56
TRA2A-203ENST00000448549 A0A0J9YWU9 116 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 MRPS14O60783 128 aaKnown RBP11.56□□□□□ -0.56
TRA2A-203ENST00000448549 LY6G6CO95867 125 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 HPRT1P00492 218 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 CLEC2LP0C7M8 214 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 NQO2P16083 231 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 SDC2P34741 201 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 ELLP55199 621 aaPredicted RBP11.56□□□□□ -0.56
TRA2A-203ENST00000448549 FXYD4P59646 89 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 EWSR1Q01844 656 aaKnown RBP eCLIP11.56□□□□□ -0.561e-8■□□□□ 8.4
TRA2A-203ENST00000448549 MXD1Q05195 221 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 OR10W1Q8NGF6 305 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 SLC25A38Q96DW6 304 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 C5orf66Q9H5L9 145 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 THYN1Q9P016 225 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 UBQLN2Q9UHD9 624 aa11.56□□□□□ -0.56
TRA2A-203ENST00000448549 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
TRA2A-203ENST00000448549 RPA2P15927 270 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 CATR1Q13166 79 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 POU2AF1Q16633 256 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 ZNF818PQ6ZRF7 136 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 SLC38A6Q8IZM9 456 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 DMBX1Q8NFW5 382 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 OR51H1Q8NH63 302 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 SRSF8Q9BRL6 282 aaKnown RBP11.55□□□□□ -0.56
TRA2A-203ENST00000448549 QTRT1Q9BXR0 403 aaKnown RBP11.55□□□□□ -0.56
TRA2A-203ENST00000448549 ZNF436Q9C0F3 470 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-203ENST00000448549 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 RAB26Q9ULW5 256 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
TRA2A-203ENST00000448549 OR2T8A6NH00 312 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 TGOLN2O43493 480 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 SPRY2O43597 315 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 S1PR2O95136 353 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 OR13C7P0DN81 318 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 APOC4P55056 127 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 IDNKQ5T6J7 187 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 Q6ZWC4 215 aa11.54□□□□□ -0.56
TRA2A-203ENST00000448549 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms