RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 PRSS8Q16651 343 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 OTOGLQ3ZCN5 2332 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 OVCH2Q7RTZ1 564 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 CLEC9AQ6UXN8 241 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 Q96M66 194 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
FN1-212ENST00000446046 ZXDCQ2QGD7 858 aaPredicted RBP9.97□□□□□ -0.81
FN1-212ENST00000446046 UNQ6494/PRO21346Q6UXR6 183 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 AQP3Q92482 292 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 SPSB4Q96A44 273 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 KLK13Q9UKR3 277 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 IGLV3-12A0A075B6K2 115 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 IGKV3D-15A0A087WSY6 115 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 RBFOX2O43251 390 aaKnown RBP eCLIP9.97□□□□□ -0.811e-8■■■■■ 27.7
FN1-212ENST00000446046 IGKV3-15P01624 115 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 BCL2P10415 239 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 CD81P60033 236 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 RPRMQ9NS64 109 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 DNAL4O96015 105 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 TCL1AP56279 114 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 PGLYRP1O75594 196 aaPredicted RBP9.97□□□□□ -0.81
FN1-212ENST00000446046 TIMP3P35625 211 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 C1orf100Q5SVJ3 147 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 POC1AQ8NBT0 407 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 ZNF502Q8TBZ5 544 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 SMIM8Q96KF7 97 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
FN1-212ENST00000446046 GGCTO75223 188 aaKnown RBP9.96□□□□□ -0.81
FN1-212ENST00000446046 RND2P52198 227 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 NANOS3P60323 173 aaKnown RBP9.96□□□□□ -0.81
FN1-212ENST00000446046 CD69Q07108 199 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 TMSB15BA0A087X1C1 80 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 KBTBD11O94819 623 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 SPINK2P20155 84 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 ASIPP42127 132 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 FAM27E3Q08E93 113 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 ITLN2Q8WWU7 325 aaPredicted RBP9.96□□□□□ -0.81
FN1-212ENST00000446046 C12orf57Q99622 126 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 AP4M1O00189 453 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 ATP6V0CP27449 155 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 RPS11P62280 158 aaKnown RBP eCLIP9.96□□□□□ -0.81
FN1-212ENST00000446046 CACNG8Q8WXS5 425 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 TNFRSF14Q92956 283 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 DUX3Q96PT4 197 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 NTN1O95631 604 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 C8orf46Q8TAG6 207 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 TAF15Q92804 592 aaKnown RBP eCLIP9.96□□□□□ -0.819e-7■■□□□ 12.6
FN1-212ENST00000446046 TLNRD1Q9H1K6 362 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 KLHDC2Q9Y2U9 406 aa9.96□□□□□ -0.81
FN1-212ENST00000446046 IL4P05112 153 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 SSTR5P35346 364 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
FN1-212ENST00000446046 FAM24BQ8N5W8 94 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 WDYHV1Q96HA8 205 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 PGPA6NDG6 321 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 ZIC3O60481 467 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 THBDP07204 575 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 VGLL1Q99990 258 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 IER3P46695 156 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 IRF3Q14653 427 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 TBX15Q96SF7 602 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 C1QTNF5Q9BXJ0 243 aa9.96□□□□□ -0.82
FN1-212ENST00000446046 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 OR4C46A6NHA9 309 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 LDLRAD2Q5SZI1 272 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 SOSTQ9BQB4 213 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 SPNP16150 400 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 MRPL54Q6P161 138 aaKnown RBP9.95□□□□□ -0.82
FN1-212ENST00000446046 COLCA1Q6ZS62 124 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
FN1-212ENST00000446046 RCC1P18754 421 aaPredicted RBP9.95□□□□□ -0.82
FN1-212ENST00000446046 LHX2P50458 406 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 TAS2R60P59551 318 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 APCDD1LQ8NCL9 501 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 ARL14EPLP0DKL9 152 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
FN1-212ENST00000446046 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 SGMS2Q8NHU3 365 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 IGHV1-2P23083 117 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 NEUROG3Q9Y4Z2 214 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 MVDP53602 400 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 FAM166AQ6J272 317 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 OR10D4PQ8NGN7 298 aa9.95□□□□□ -0.82
FN1-212ENST00000446046 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
FN1-212ENST00000446046 TMEM250H0YL14 139 aa9.94□□□□□ -0.82
FN1-212ENST00000446046 TCF19Q9Y242 345 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms