RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
IRF3-204ENST00000442265 IFT46Q9NQC8 304 aa12.55□□□□□ -0.4
IRF3-204ENST00000442265 COMMD9Q9P000 198 aa12.55□□□□□ -0.4
IRF3-204ENST00000442265 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 UPK2O00526 184 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 NDUFB8O95169 186 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 FCER2P06734 321 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 RFX2P48378 723 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 TAS2R46P59540 309 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 FXYD4P59646 89 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 CMTM3Q96MX0 182 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 ZC4H2Q9NQZ6 224 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
IRF3-204ENST00000442265 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 IGLC7A0M8Q6 106 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 C2orf70A6NJV1 201 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 ZNF785A8K8V0 405 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 MYOD1P15172 320 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 HERV-K104P61576 105 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 DEFB114Q30KQ6 69 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
IRF3-204ENST00000442265 TMEM17Q86X19 198 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 HRASLSQ9HDD0 168 aa12.53□□□□□ -0.4
IRF3-204ENST00000442265 TECRQ9NZ01 308 aaKnown RBP12.53□□□□□ -0.4
IRF3-204ENST00000442265 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 A8MWP6 167 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.41
IRF3-204ENST00000442265 S1PR2O95136 353 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 OR2C1O95371 312 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 FOLR2P14207 255 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 F2RP25116 425 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 PRSS3P35030 304 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 LSM3P62310 102 aaKnown RBP12.52□□□□□ -0.41
IRF3-204ENST00000442265 CASC10Q5T4H9 136 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 AADACL3Q5VUY0 350 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.41
IRF3-204ENST00000442265 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.41
IRF3-204ENST00000442265 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 OR51H1Q8NH63 302 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 GPX8Q8TED1 209 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 EEF1AKMT3Q96AZ1 226 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 LYSTQ99698 3801 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 ZNF2Q9BSG1 426 aaPredicted RBP12.52□□□□□ -0.41
IRF3-204ENST00000442265 COMMD5Q9GZQ3 224 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 TMEM140Q9NV12 185 aa12.52□□□□□ -0.41
IRF3-204ENST00000442265 STARD9Q9P2P6 4700 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 RYR2Q92736 4967 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
IRF3-204ENST00000442265 APOA1P02647 267 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 DEFA4P12838 97 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 ARL3P36405 182 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 HAGHQ16775 308 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 CLEC19AQ6UXS0 136 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 HSD17B13Q7Z5P4 300 aaPredicted RBP12.51□□□□□ -0.41
IRF3-204ENST00000442265 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 FUNDC2Q9BWH2 189 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
IRF3-204ENST00000442265 EDA2RQ9HAV5 297 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 SCPEP1Q9HB40 452 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
IRF3-204ENST00000442265 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
IRF3-204ENST00000442265 MARCH11A6NNE9 402 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 PMP2P02689 132 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 REG1AP05451 166 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 EIF4EP06730 217 aaKnown RBP12.5□□□□□ -0.41
IRF3-204ENST00000442265 FAM106AQ4KMX7 169 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 DGCR14Q96DF8 476 aaKnown RBP12.5□□□□□ -0.41
IRF3-204ENST00000442265 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
IRF3-204ENST00000442265 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 MFSD2BA6NFX1 497 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 RLN1P04808 185 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 CLEC3BP05452 202 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 CBLN1P23435 193 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 PTBP1P26599 531 aaKnown RBP eCLIP12.49□□□□□ -0.41
IRF3-204ENST00000442265 NCS1P62166 190 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 GDPD1Q8N9F7 314 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 ZNF502Q8TBZ5 544 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 ATP6V0BQ99437 205 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 NEURL2Q9BR09 285 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 FXYD6Q9H0Q3 95 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 TUBA4BQ9H853 241 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 NDUFA4L2Q9NRX3 87 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 THYN1Q9P016 225 aa12.49□□□□□ -0.41
IRF3-204ENST00000442265 SMIM31A0A1B0GVY4 71 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 GPR31O00270 319 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 IGHV3-23P01764 117 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 SERPINE2P07093 398 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 TRAPPC2P0DI81 140 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 TRAPPC2BP0DI82 140 aa12.48□□□□□ -0.41
IRF3-204ENST00000442265 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms