RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RIPPLY2Q5TAB7 128 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 Q6ZN92 141 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 Q8N7P7 452 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 RAB1CQ92928 201 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 SNRNP40Q96DI7 357 aaKnown RBP7.13□□□□□ -1.27
HPS4-206ENST00000439453 TMEM204Q9BSN7 226 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
HPS4-206ENST00000439453 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 SH2D1BO14796 132 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 HYPMO75409 117 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 MMP23AO75900 390 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 P0C879 139 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 IGLC2P0DOY2 106 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 LGALS4P56470 323 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 ZNF816Q0VGE8 651 aaPredicted RBP7.13□□□□□ -1.27
HPS4-206ENST00000439453 ABHD17BQ5VST6 288 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 ZADH2Q8N4Q0 377 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 STARD4Q96DR4 205 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 GNB4Q9HAV0 340 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
HPS4-206ENST00000439453 ESPL1Q14674 2120 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 SNURFLB1AK76 121 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 CXCL13O43927 109 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 FRMD6-AS1P0C7T7 363 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 EDDM3BP56851 147 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 MOB1BQ7L9L4 216 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 TXNDC17Q9BRA2 123 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 NRN1Q9NPD7 142 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 TRAPPC2LQ9UL33 140 aa7.13□□□□□ -1.27
HPS4-206ENST00000439453 ITGB1BP1O14713 200 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 IGHV3-9P01782 118 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 B3GALT5-AS1P59052 145 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 SPINK9Q5DT21 86 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 YRDCQ86U90 279 aaKnown RBP7.12□□□□□ -1.27
HPS4-206ENST00000439453 SPOCK3Q9BQ16 436 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 C5orf49A4QMS7 147 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 K7EN84 100 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 SP1P08047 785 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 ARL14EPLP0DKL9 152 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 ARG2P78540 354 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 SRSF1Q07955 248 aaKnown RBP eCLIP7.12□□□□□ -1.27
HPS4-206ENST00000439453 PSG7Q13046 419 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 Q6P435 159 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 ZGRF1Q86YA3 2104 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 ZNF253O75346 499 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 AMTP48728 403 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 SSR4P51571 173 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 IGFBP7Q16270 282 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 ZNF766Q5HY98 468 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 GGNQ86UU5 652 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 APH1AQ96BI3 265 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 GTF3C1Q12789 2109 aa7.12□□□□□ -1.27
HPS4-206ENST00000439453 TRBV9A0A0B4J1U6 114 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 SIRPB1O00241 398 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 S1PR2O95136 353 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 CDKN1BP46527 198 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 RPL30P62888 115 aaKnown RBP7.11□□□□□ -1.27
HPS4-206ENST00000439453 RPEL1Q2QD12 228 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 A8MXE2 369 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 K7EP13 123 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 CD1BP29016 333 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 UBE2V1Q13404 147 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 ZNF497Q6ZNH5 498 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 MMD2Q8IY49 270 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 GNB1LQ9BYB4 327 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 USF3Q68DE3 2245 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 ADGRG4Q8IZF6 3080 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 SAA2-SAA4A0A096LPE2 208 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 LOC102724200A0A096LPH7 203 aaPredicted RBP7.11□□□□□ -1.27
HPS4-206ENST00000439453 TRAV17A0A0B4J275 112 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 RHBDL1O75783 438 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 TOMM40O96008 361 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 PMCHP20382 165 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 NTF3P20783 257 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 CYB561P49447 251 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 ZNF645Q8N7E2 425 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 SFXN3Q9BWM7 321 aa7.11□□□□□ -1.27
HPS4-206ENST00000439453 A0A096LPE4 126 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 A0A1W2PPZ6 126 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 A0A1W2PS18 150 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 C15orf62A8K5M9 175 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 RAB29O14966 203 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 NGFP01138 241 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 STAG3L2P0CL84 134 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 STAG3L3P0CL85 134 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 UQCRFS1P47985 274 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 GNG3P63215 75 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 C9orf135Q5VTT2 229 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 Q6ZVH6 145 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZNF808Q8N4W9 903 aaPredicted RBP7.1□□□□□ -1.27
HPS4-206ENST00000439453 ST6GALNAC3Q8NDV1 305 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR10D3Q8NH80 312 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 YTHDF2Q9Y5A9 579 aaKnown RBP7.1□□□□□ -1.27
HPS4-206ENST00000439453 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 C17orf98A8MV24 154 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms