RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
CCDC13-202ENST00000435327 FN1P02751 2386 aaKnown RBP13.18□□□□□ -0.3
CCDC13-202ENST00000435327 ST8SIA3O43173 380 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 CNIH1O95406 144 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 SCGB1D2O95969 90 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 OPN1MWP04001 364 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 RNASE1P07998 156 aaKnown RBP13.18□□□□□ -0.3
CCDC13-202ENST00000435327 OPN1MW2P0DN77 364 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 OPN1MW3P0DN78 364 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
CCDC13-202ENST00000435327 BCAP31P51572 246 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 ABHD5Q8WTS1 349 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 HSPB9Q9BQS6 159 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
CCDC13-202ENST00000435327 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 TEX50A0A1B0GTY4 177 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 TRIM77I1YAP6 450 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 PITX3O75364 302 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 IFNA17P01571 189 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 H2BFSP57053 126 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 BLCAPP62952 87 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 CX3CL1P78423 397 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 FXYD3Q14802 87 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 OR4D5Q8NGN0 318 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 OR1L8Q8NGR8 309 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 GRPEL2Q8TAA5 225 aa13.17□□□□□ -0.3
CCDC13-202ENST00000435327 FYTTD1Q96QD9 318 aaKnown RBP13.17□□□□□ -0.3
CCDC13-202ENST00000435327 PLXNB1O43157 2135 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 ANK3Q12955 4377 aaKnown RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 CRYBA1P05813 215 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 FGF2P09038 288 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 TRAPPC2P0DI81 140 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 TRAPPC2BP0DI82 140 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 COMPP49747 757 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 HSPE1P61604 102 aaKnown RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 CXorf66Q5JRM2 361 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 OR5B3Q8NH48 314 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 WDR89Q96FK6 387 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 ZNF436Q9C0F3 470 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 PARP11Q9NR21 331 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 ZNF257Q9Y2Q1 563 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 TEP1Q99973 2627 aaKnown RBP13.16□□□□□ -0.3
CCDC13-202ENST00000435327 TNCP24821 2201 aa13.16□□□□□ -0.3
CCDC13-202ENST00000435327 WRBO00258 174 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 SPCS3P61009 180 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 NDPQ00604 133 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 CD83Q01151 205 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 Q6ZS46 218 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 OR52E5Q8NH55 327 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
CCDC13-202ENST00000435327 NMES1Q9C002 83 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
CCDC13-202ENST00000435327 LSM5Q9Y4Y9 91 aaKnown RBP13.15□□□□□ -0.3
CCDC13-202ENST00000435327 CEBPZOSA8MTT3 80 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 FAM90A26D6RGX4 464 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 E7EUB6 86 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 ATP6V0E1O15342 81 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 KCNAB3O43448 404 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 GIPP09681 153 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-202ENST00000435327 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-202ENST00000435327 S100A10P60903 97 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 PRCDQ00LT1 54 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
CCDC13-202ENST00000435327 AARDQ4LEZ3 155 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 RBKSQ9H477 322 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 ZNF702PQ9H963 129 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 HSPB7Q9UBY9 170 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 CACFD1Q9UGQ2 172 aa13.14□□□□□ -0.31
CCDC13-202ENST00000435327 MSGN1A6NI15 193 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 LINC01548A6NM66 108 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 MED6O75586 246 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 IGHG2P01859 326 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-202ENST00000435327 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
CCDC13-202ENST00000435327 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC13-202ENST00000435327 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
CCDC13-202ENST00000435327 ID3Q02535 119 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 IL15RAQ13261 267 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 RAB32Q13637 225 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
CCDC13-202ENST00000435327 PLEKHA3Q9HB20 300 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms