RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 C1QTNF4Q9BXJ3 329 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 IGKV1-6A0A0C4DH72 117 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 BET1O15155 118 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 OGG1O15527 345 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 FABP7O15540 132 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 FCGR1AP12314 374 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 CELP19835 753 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 CRHBPP24387 322 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 DUSP18Q8NEJ0 188 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 OR4S2Q8NH73 311 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
NUP50-209ENST00000432340 GINS4Q9BRT9 223 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 YTHDF1Q9BYJ9 559 aaKnown RBP11.26□□□□□ -0.61
NUP50-209ENST00000432340 HSF4Q9ULV5 492 aa11.26□□□□□ -0.61
NUP50-209ENST00000432340 TRBV5-7A0A0A0MS05 114 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 GIG44P09565 113 aaPredicted RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 CD36P16671 472 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 MAPK3P27361 379 aaPredicted RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 XAF1Q6GPH4 301 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 KCTD9Q7L273 389 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 HDHD3Q9BSH5 251 aaPredicted RBP11.25□□□□□ -0.61
NUP50-209ENST00000432340 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
NUP50-209ENST00000432340 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 LINC00473A8K010 186 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 SLC22A5O76082 557 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 HRASP01112 189 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 REG1AP05451 166 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 HLA-GP17693 338 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 TCF24Q7RTU0 167 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 HSD17B13Q7Z5P4 300 aaPredicted RBP11.24□□□□□ -0.61
NUP50-209ENST00000432340 CABLES2Q9BTV7 478 aa11.24□□□□□ -0.61
NUP50-209ENST00000432340 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 A0A1W2PPK0 400 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 E7EUB6 86 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 YIF1AO95070 293 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 RPL11P62913 178 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 OR10K2Q6IF99 312 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 VKORC1L1Q8N0U8 176 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 PUSL1Q8N0Z8 303 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 OR52I1Q8NGK6 324 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
NUP50-209ENST00000432340 MRPS18AQ9NVS2 196 aaKnown RBP11.23□□□□□ -0.61
NUP50-209ENST00000432340 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
NUP50-209ENST00000432340 DCKP27707 260 aa11.22□□□□□ -0.61
NUP50-209ENST00000432340 Q56UQ5 140 aa11.22□□□□□ -0.61
NUP50-209ENST00000432340 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
NUP50-209ENST00000432340 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
NUP50-209ENST00000432340 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
NUP50-209ENST00000432340 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 MYL12AP19105 171 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 C4BPBP20851 252 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 FGF9P31371 208 aaPredicted RBP11.21□□□□□ -0.61
NUP50-209ENST00000432340 TAS2R43P59537 309 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 OXA1LQ15070 435 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 UBAC2Q8NBM4 344 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 OR10C1Q96KK4 312 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 DERL3Q96Q80 235 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
NUP50-209ENST00000432340 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
NUP50-209ENST00000432340 IRGMA1A4Y4 181 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 FAM229AH3BQW9 127 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 CDK1P06493 297 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 RANBP1P43487 201 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 RPS11P62280 158 aaKnown RBP eCLIP11.2□□□□□ -0.62
NUP50-209ENST00000432340 DNAL1Q4LDG9 190 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 GDPD1Q8N9F7 314 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 HSD17B10Q99714 261 aaKnown RBP11.2□□□□□ -0.62
NUP50-209ENST00000432340 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 POMPQ9Y244 141 aa11.2□□□□□ -0.62
NUP50-209ENST00000432340 TMEM14DPA8MWL7 114 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 CD3GP09693 182 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 HTN3P15516 51 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 GYS2P54840 703 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 CCL18P55774 89 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 OR2B8PP59922 312 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 KRTAP10-2P60368 255 aa11.19□□□□□ -0.62
NUP50-209ENST00000432340 UNC119Q13432 240 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms