RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 SIRT7Q9NRC8 400 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 RAXQ9Y2V3 346 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 TNCP24821 2201 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 A0A087X0M5 115 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 A0A1B0GX30 115 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 hCG_1809904A0A1W2PP81 198 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 A0A1W2PR64 198 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 CXorf65A6NEN9 183 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 B9A039 149 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 MYOD1P15172 320 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
HOXC4-202ENST00000430889 ZNF137PP52743 207 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 CEBPGP53567 150 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
HOXC4-202ENST00000430889 PNRC1Q12796 327 aaPredicted RBP11.37□□□□□ -0.59
HOXC4-202ENST00000430889 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 TMEM155Q4W5P6 130 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 SLC24A4Q8NFF2 622 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 OR5AN1Q8NGI8 311 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 MRPL20Q9BYC9 149 aaKnown RBP11.37□□□□□ -0.59
HOXC4-202ENST00000430889 SAV1Q9H4B6 383 aaPredicted RBP11.37□□□□□ -0.59
HOXC4-202ENST00000430889 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 BIN3Q9NQY0 253 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 OR51B2Q9Y5P1 312 aa11.37□□□□□ -0.59
HOXC4-202ENST00000430889 PKDREJQ9NTG1 2253 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 H0YJW9 148 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 DVL1O14640 695 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 NDUFB3O43676 98 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 FSTL3O95633 263 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 PLAUP00749 431 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 CD3EP07766 207 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 NPY1RP25929 384 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
HOXC4-202ENST00000430889 PRCDQ00LT1 54 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 LRRC10Q5BKY1 277 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
HOXC4-202ENST00000430889 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 ZFP82Q8N141 532 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 DYNLRB1Q9NP97 96 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 C1orf196B1AJZ1 125 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
HOXC4-202ENST00000430889 CYB5BO43169 146 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 CA2P00918 260 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 SAA1P0DJI8 122 aaPredicted RBP11.36□□□□□ -0.59
HOXC4-202ENST00000430889 DEFA4P12838 97 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 RAB5BP61020 215 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 GCSAMLQ5JQS6 135 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 C11orf42Q8N5U0 333 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 OSR1Q8TAX0 266 aaPredicted RBP11.36□□□□□ -0.59
HOXC4-202ENST00000430889 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
HOXC4-202ENST00000430889 KALRNO60229 2985 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 J3QR06 171 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 TSPAN9O75954 239 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 KBTBD11O94819 623 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
HOXC4-202ENST00000430889 CHRNB4P30926 498 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 PSMB3P49720 205 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 RND2P52198 227 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 KLRB1Q12918 225 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 ELOBQ15370 118 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 C2CD4CQ8TF44 421 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 NABP2Q9BQ15 211 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
HOXC4-202ENST00000430889 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 CASP6P55212 293 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 Q8WTZ3 238 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 TMEM204Q9BSN7 226 aa11.34□□□□□ -0.59
HOXC4-202ENST00000430889 C5orf52A6NGY3 159 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 IFNA4P05014 189 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
HOXC4-202ENST00000430889 CDSNQ15517 529 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 LINC00518Q8N0U6 118 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 OR5B3Q8NH48 314 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 H1FXQ92522 213 aaKnown RBP11.33□□□□□ -0.6
HOXC4-202ENST00000430889 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PXMP4Q9Y6I8 212 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 SMCO3A2RU48 225 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 FAM90A27PA6NNH2 459 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 IGHV2-5P01817 119 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 APOA2P02652 100 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 CXCL1P09341 107 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms