RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 TEX45Q8NA69 505 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 RBPMSQ93062 196 aaKnown RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 GPN1Q9HCN4 374 aaPredicted RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 SLC2A8Q9NY64 477 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 CYB5BO43169 146 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 RBFOX2O43251 390 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC7-203ENST00000428239 KBTBD11O94819 623 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 PF4P02776 101 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 TPPP2P59282 170 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 UBE2MP61081 183 aaKnown RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 NRARPQ7Z6K4 114 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 STPG2Q8N412 459 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 OR51B2Q9Y5P1 312 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 A6NJY4 79 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 PLA2G10O15496 165 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 TSPAN9O75954 239 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 HLA-DRB1P01911 266 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 OR13C7P0DN81 318 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 MYOD1P15172 320 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 HLA-GP17693 338 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 EBI3Q14213 229 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 TEX38Q6PEX7 206 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 DDB2Q92466 427 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 RTBDNQ9BSG5 229 aaPredicted RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 PLEKHA3Q9HB20 300 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
CDC7-203ENST00000428239 CACNG5Q9UF02 275 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 PRNDQ9UKY0 176 aa5.56□□□□□ -1.52
CDC7-203ENST00000428239 IGHV7-81A0A0B4J1V7 117 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 PIGBOS1A0A0B4J2F0 54 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 CRYM-AS1A6NIL9 109 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 INMT-MINDY4F8WBC2 141 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 NDUFA7O95182 113 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 IGHV3-11P01762 117 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 TRGV3P03979 118 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 OR4E1P0C645 316 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 SLC25A24Q6NUK1 477 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 ZNF562Q6V9R5 426 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 FAM71E2Q8N5Q1 922 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 OR52B4Q8NGK2 314 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 OR1L8Q8NGR8 309 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 DPF1Q92782 380 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 PINX1Q96BK5 328 aaKnown RBP5.55□□□□□ -1.52
CDC7-203ENST00000428239 TMEM56Q96MV1 263 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 SEC22CQ9BRL7 303 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 TMEM222Q9H0R3 208 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 TRAV3A0A0B4J244 114 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 RND3P61587 244 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 ASAH1Q13510 395 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 C10orf99Q6UWK7 81 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 Q8N6K4 173 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 NPBQ8NG41 125 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 PPP1R14BQ96C90 147 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 QTRT1Q9BXR0 403 aaKnown RBP5.55□□□□□ -1.52
CDC7-203ENST00000428239 PLSCR3Q9NRY6 295 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 FKBP11Q9NYL4 201 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 FOXA2Q9Y261 457 aaPredicted RBP5.55□□□□□ -1.52
CDC7-203ENST00000428239 NUBP2Q9Y5Y2 271 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 NOTCH3Q9UM47 2321 aa5.55□□□□□ -1.52
CDC7-203ENST00000428239 IGHG2P01859 326 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 PRH1P02810 166 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 AMY1AP04745 511 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 CD28P10747 220 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 ERHP84090 104 aaKnown RBP5.54□□□□□ -1.52
CDC7-203ENST00000428239 DEFA5Q01523 94 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 RGS21Q2M5E4 152 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 LYZL2Q7Z4W2 148 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 KLHL30-AS1Q8NEE0 82 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 FAM110DQ8TAY7 271 aaPredicted RBP5.54□□□□□ -1.52
CDC7-203ENST00000428239 UPK2O00526 184 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 NDUFA3O95167 84 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 TRAPPC2P0DI81 140 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 TRAPPC2BP0DI82 140 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 DHRS2Q13268 280 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 ZNF585BQ52M93 769 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 GLYATL2Q8WU03 294 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
CDC7-203ENST00000428239 GNB4Q9HAV0 340 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
CDC7-203ENST00000428239 TNCP24821 2201 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 CCSO14618 274 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 SFT2D2O95562 160 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 FGF2P09038 288 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 SULT1A3P0DMM9 295 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 SULT1A4P0DMN0 295 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 UCP1P25874 307 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 NDPQ00604 133 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 SHISA2Q6UWI4 295 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 TMEM167AQ8TBQ9 72 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 MISP3Q96FF7 219 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 SERTAD4Q9NUC0 356 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 BET1LQ9NYM9 111 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 TBC1D24Q9ULP9 559 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 S4R3C0 116 aa5.54□□□□□ -1.52
CDC7-203ENST00000428239 IGHV3-21A0A0B4J1V1 117 aa5.53□□□□□ -1.52
CDC7-203ENST00000428239 C9orf170A2RU37 121 aa5.53□□□□□ -1.52
CDC7-203ENST00000428239 TMEM89A2RUT3 159 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms