RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SRD5A3Q9H8P0 318 aa11.61□□□□□ -0.55
RPL28-202ENST00000426763 TFF1P04155 84 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 IL4P05112 153 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 MGPP08493 103 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 NCMAPQ5T1S8 102 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 RTBDNQ9BSG5 229 aaPredicted RBP11.6□□□□□ -0.55
RPL28-202ENST00000426763 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 FAM74A7A6NL05 159 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 FABP4P15090 132 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 COLCA1Q6ZS62 124 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 RAX2Q96IS3 184 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 TRAF4Q9BUZ4 470 aaPredicted RBP11.6□□□□□ -0.55
RPL28-202ENST00000426763 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 OR2D3Q8NGH3 330 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 ANGPTL6Q8NI99 470 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 NABP2Q9BQ15 211 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 CACNA1HO95180 2353 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 TMEM178BH3BS89 294 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 SSC4DQ8WTU2 575 aa11.6□□□□□ -0.55
RPL28-202ENST00000426763 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
RPL28-202ENST00000426763 IGHV3-48P01763 117 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 PLXNA2O75051 1894 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 GGACTQ9BVM4 153 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 ETV2O00321 342 aaPredicted RBP11.59□□□□□ -0.55
RPL28-202ENST00000426763 MAS1LP35410 378 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 RAB24Q969Q5 203 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 IGKV1-12A0A0C4DH73 117 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 IGKV1D-12P01611 117 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 DLX6P56179 175 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
RPL28-202ENST00000426763 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
RPL28-202ENST00000426763 ISLRO14498 428 aa11.58□□□□□ -0.55
RPL28-202ENST00000426763 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.55
RPL28-202ENST00000426763 SIGIRRQ6IA17 410 aa11.58□□□□□ -0.55
RPL28-202ENST00000426763 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.55
RPL28-202ENST00000426763 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.55
RPL28-202ENST00000426763 DDB2Q92466 427 aa11.58□□□□□ -0.55
RPL28-202ENST00000426763 LINC00862A6NCI5 91 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 C1QL1O75973 258 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
RPL28-202ENST00000426763 C11orf42Q8N5U0 333 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 NIT2Q9NQR4 276 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 C21orf62Q9NYP8 219 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 CD8AP01732 235 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.56
RPL28-202ENST00000426763 PRSS22Q9GZN4 317 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 SAA1P0DJI8 122 aaPredicted RBP11.58□□□□□ -0.56
RPL28-202ENST00000426763 RNF212Q495C1 297 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 CRIM1Q9NZV1 1036 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 MDC1Q14676 2089 aaKnown RBP11.58□□□□□ -0.56
RPL28-202ENST00000426763 CACNA1BQ00975 2339 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 CGB1A6NKQ9 187 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 SIAH2O43255 324 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 NDUFB4O95168 129 aa11.58□□□□□ -0.56
RPL28-202ENST00000426763 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
RPL28-202ENST00000426763 HSPB7Q9UBY9 170 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 DPRXA6NFQ7 191 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 A8MWL6 223 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
RPL28-202ENST00000426763 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 TSPOP30536 169 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 KLHDC1Q8N7A1 406 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 VOPP1Q96AW1 172 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 PSMG3Q9BT73 122 aaPredicted RBP11.57□□□□□ -0.56
RPL28-202ENST00000426763 KIF26BQ2KJY2 2108 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 UPK2O00526 184 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 CSN3P07498 182 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
RPL28-202ENST00000426763 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
RPL28-202ENST00000426763 IGKV1D-13A0A0B4J2D9 117 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 MSGN1A6NI15 193 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 IGKV1-13P0DP09 117 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 IGHV3-23P01764 117 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 HSPB1P04792 205 aaKnown RBP11.56□□□□□ -0.56
RPL28-202ENST00000426763 OR5AL1P0C617 328 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 CRISP2P16562 243 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPL28-202ENST00000426763 TDGF1P13385 188 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPL28-202ENST00000426763 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
RPL28-202ENST00000426763 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 GFI1Q99684 422 aa11.56□□□□□ -0.56
RPL28-202ENST00000426763 IGKV1-27A0A075B6S5 117 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms