RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ZNF708P17019 499 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPCDR1Q9BY65 106 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 FBXL7Q9UJT9 491 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 TMEM101Q96IK0 257 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 TEX45Q8NA69 505 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ITLN2Q8WWU7 325 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 M0R381 172 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ERVH48-1M5A8F1 160 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 IFI27L2Q9H2X8 130 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 C12orf77C9JDV5 145 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 EMP1P54849 157 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 PARD6GQ9BYG4 376 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ARID1AO14497 2285 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 WDR82Q6UXN9 313 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TRAV24A0A0B4J272 114 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB13A6NJU9 1138 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB4C9JG80 1138 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 C1QTNF12Q5T7M4 302 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TNFRSF18Q9Y5U5 241 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGFBP2P18065 325 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TFF3Q07654 80 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TMEM170BQ5T4T1 132 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM216BQ8N7L0 139 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF646O15015 1829 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 CBLN1P23435 193 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 ASIPP42127 132 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NUTF2P61970 127 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 HIST1H2BAQ96A08 127 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 PSMG3Q9BT73 122 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 CGAP01215 116 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 PAPPA-AS1Q5QFB9 102 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 DPM3Q9P2X0 92 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A0G2JMM0 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PPB8 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PRS3 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 KIR3DP1A8MWS1 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PROB1E7EW31 1015 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PPP1R27Q86WC6 154 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL4A5P29400 1685 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 C18orf15Q96N68 181 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PLSCR2Q9NRY7 297 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGKV1D-43A0A0B4J1Z2 117 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ATP5IP56385 69 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 TM4SF5O14894 197 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 NHLRC3Q5JS37 347 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 DUX3Q96PT4 197 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ALKBH7Q9BT30 221 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL4A1P02462 1669 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PMCHL2Q9BQD1 86 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21A0A0G2JKD1 596 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21A0A140T8X8 626 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF506Q5JVG8 444 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21Q5SSG8 566 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 OR13A1Q8NGR1 328 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 OSR1Q8TAX0 266 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB9F8W1W9 429 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB7O75200 414 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NBEAP1P0C6P0 100 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MARVELD3Q96A59 401 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 THSD7AQ9UPZ6 1657 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 DNAL4O96015 105 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 DDTP30046 118 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 GPR183P32249 361 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 FOXA3P55318 350 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 CA7P43166 264 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV2OR16-5A0A0B4J2B6 119 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CLEC19AQ6UXS0 136 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 NEU4Q8WWR8 484 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 ARPC1AQ92747 370 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 GP6Q9HCN6 339 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CBLN4Q9NTU7 201 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CSRP2Q16527 193 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CDX1P47902 265 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF414Q96IQ9 312 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 PRELID3AQ96N28 172 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 TM2D1Q9BX74 207 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 TRAV8-6A0A0B4J262 113 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PRX2 142 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM168AQ92567 244 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV3OR16-8A0A075B7F1 116 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RNASE4P34096 147 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RTN4RL2Q86UN3 420 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 MRPL20Q9BYC9 149 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 H7C1H1 209 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 TTC32Q5I0X7 151 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RCC1LQ96I51 464 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 SMIM13P0DJ93 91 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV1-2P23083 117 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 CCDC88CQ9P219 2028 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 EFEMP2O95967 443 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM57AQ8TBR7 257 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RPRMQ9NS64 109 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms