RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TMEM231Q9H6L2 316 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 INSIG2Q9Y5U4 225 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 AKAP6Q13023 2319 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 ENSAO43768 121 aaKnown RBP21.41■■□□□ 1.02
LDB1-202ENST00000425280 ETV3LQ6ZN32 361 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 OR11H6Q8NGC7 330 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 TMEM167AQ8TBQ9 72 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 FAM96BQ9Y3D0 163 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 ZNF462Q96JM2 2506 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 TNCP24821 2201 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 USF1P22415 310 aaPredicted RBP21.4■■□□□ 1.02
LDB1-202ENST00000425280 PRTN3P24158 256 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 OR5B3Q8NH48 314 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 OR4A5Q8NH83 315 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 VSTM2AQ8TAG5 236 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 RPEQ96AT9 228 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 CCL19Q99731 98 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 PLEKHA3Q9HB20 300 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 PRSS46E5RG02 174 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 SNCAP37840 140 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 RPL8P62917 257 aaKnown RBP21.4■■□□□ 1.02
LDB1-202ENST00000425280 LDLRAD2Q5SZI1 272 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 HCP5Q6MZN7 132 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 DPPA3Q6W0C5 159 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 MOB3BQ86TA1 216 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 SLC24A4Q8NFF2 622 aa21.4■■□□□ 1.02
LDB1-202ENST00000425280 COL12A1Q99715 3063 aa21.39■■□□□ 1.02
LDB1-202ENST00000425280 MDKP21741 143 aaPredicted RBP21.39■■□□□ 1.01
LDB1-202ENST00000425280 FGF7P21781 194 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 KLRD1Q13241 179 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 C1orf122Q6ZSJ8 110 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 COMMD1Q8N668 190 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 KIR3DL3Q8N743 410 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 TREM1Q9NP99 234 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 TIMM9Q9Y5J7 89 aa21.39■■□□□ 1.01
LDB1-202ENST00000425280 TMEM218A2RU14 115 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 NPY1RP25929 384 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 LMO4P61968 165 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 RAB11AP62491 216 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 SERF2P84101 59 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 CENPVQ7Z7K6 275 aaPredicted RBP21.38■■□□□ 1.01
LDB1-202ENST00000425280 CLDND2Q8NHS1 167 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 LGALS7P47929 136 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 SRSF1Q07955 248 aaKnown RBP eCLIP21.38■■□□□ 1.01
LDB1-202ENST00000425280 VSIRQ9H7M9 311 aa21.38■■□□□ 1.01
LDB1-202ENST00000425280 EPG5Q9HCE0 2579 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 A0A1B0GV50 99 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 CA2P00918 260 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 PDLIM4P50479 330 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 LCN2P80188 198 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 PAX2Q02962 417 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 HNF4GQ14541 408 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 VMA21Q3ZAQ7 101 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 COMMD5Q9GZQ3 224 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 RPRMQ9NS64 109 aa21.37■■□□□ 1.01
LDB1-202ENST00000425280 RNASEK-C17orf49H0YIS7 233 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 SLC25A17O43808 307 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 IFNA4P05014 189 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 H2AFB1P0C5Y9 115 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 TPTE2P1Q5T6R2 138 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 SPSB3Q6PJ21 355 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 NDUFA4L2Q9NRX3 87 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 MYO18BQ8IUG5 2567 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 A0A1W2PPI3 338 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 ODF3BA8MYP8 253 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 CD5P06127 495 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 HTR1DP28221 377 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 CD1BP29016 333 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 OR1L8Q8NGR8 309 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 GGACTQ9BVM4 153 aa21.36■■□□□ 1.01
LDB1-202ENST00000425280 ZNF430Q9H8G1 570 aaPredicted RBP21.36■■□□□ 1.01
LDB1-202ENST00000425280 SCO1O75880 301 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 VMO1Q7Z5L0 202 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 SCRT1Q9BWW7 348 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 TPSG1Q9NRR2 321 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 KPTNQ9Y664 436 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 DVL1P1P54792 670 aaPredicted RBP21.35■■□□□ 1.01
LDB1-202ENST00000425280 DLK1P80370 383 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 MRGPRG-AS1Q2M3A8 158 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 SP5Q6BEB4 398 aaPredicted RBP21.35■■□□□ 1.01
LDB1-202ENST00000425280 NPCDR1Q9BY65 106 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 UNKLQ9H9P5 680 aaKnown RBP21.35■■□□□ 1.01
LDB1-202ENST00000425280 DPM3Q9P2X0 92 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 WDR83OSQ9Y284 106 aa21.35■■□□□ 1.01
LDB1-202ENST00000425280 ELLP55199 621 aaPredicted RBP21.34■■□□□ 1.01
LDB1-202ENST00000425280 CCL20P78556 96 aa21.34■■□□□ 1.01
LDB1-202ENST00000425280 LFNGQ8NES3 379 aa21.34■■□□□ 1.01
LDB1-202ENST00000425280 OR10W1Q8NGF6 305 aa21.34■■□□□ 1.01
LDB1-202ENST00000425280 IGHV2-70DA0A0C4DH43 119 aa21.33■■□□□ 1.01
LDB1-202ENST00000425280 E7EUB6 86 aa21.33■■□□□ 1.01
LDB1-202ENST00000425280 APOC3P02656 99 aa21.33■■□□□ 1.01
LDB1-202ENST00000425280 ADCYAP1P18509 176 aa21.33■■□□□ 1.01
LDB1-202ENST00000425280 TMEM41BQ5BJD5 291 aa21.33■■□□□ 1.01
LDB1-202ENST00000425280 TACC2O95359 2948 aa21.33■■□□□ 1
LDB1-202ENST00000425280 CNTFRP26992 372 aa21.33■■□□□ 1
LDB1-202ENST00000425280 TEX45Q8NA69 505 aa21.33■■□□□ 1
LDB1-202ENST00000425280 SFT2D1Q8WV19 159 aa21.33■■□□□ 1
LDB1-202ENST00000425280 SIRPDQ9H106 197 aa21.33■■□□□ 1
LDB1-202ENST00000425280 SMCO3A2RU48 225 aa21.32■■□□□ 1
LDB1-202ENST00000425280 CGB1A6NKQ9 187 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms